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Protein Overview: FBpp0311844, CG1...

General Information:
Name(s) found: FBpp0311844 [FlyBase]
CG12325-PA / FBpp0087322 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=2R:join(6711205..6711222,6711276..6711388,6711444..6712709,6712768..6713107,6713173..6713318,6713376..6713523,6713585..6713819,6713884..6714045,6714403..6714619,6714680..6714884); ID=FBpp0311844; name=CG12325-PB; parent=FBgn0033557,FBtr0345930; dbxref=FlyBase:FBpp0311844,FlyBase_Annotation_IDs:CG12325-PB; MD5=e3a65cb2fcb051a0510a2f1aba5ec735; length=949; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12325 (CG12325, FBgn0033557). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6711105..6715149. It has the cytological map location 47C1. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 949 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSYKFSNL LGTIYRNGNL VFTPDGNSVI SPVGNRITVY DLKNNKSRTL SLESRYNYTN  60
   61 IALSPDGSLL IAVNEKGEAQ LISMMSCTVI HRHKFQTGVQ CICFSPNGAF FAVAVQNVVL 120
  121 IFCAPGEITG EYNPFVLRRR FLGGFDDVTW LDWSSDSRLL AIGCRDSSTK IVAINYTKNF 180
  181 RTYNLSGHTD AIVACFFEAN SLHLNTISRN GQLCLWECSL APSDLEDAER PKIAPPQRKK 240
  241 EKKAVSDNES EDDVENVVEK DALKEESTKE AEDVNHIKNE DETKSHPFFY KKITRHYLAD 300
  301 EPRKEQRDVQ LTAANYNTRT KVLVVAFSSG AFYLYELPDV NMIHSLSISD YPISAALFNC 360
  361 TGDWVALASR EIGQLLVWEW QSEQYIMKQQ GHSSEMTCIA YSSDGQFIAT GGEDSKVKLW 420
  421 NTQSSFCFVT FSEHTSGVTG IQFSRNKKFL VSSSLDGTVR AFDVNRYRNF RTFTSPNPAQ 480
  481 FSCVAVDYSG ELVVAGGQDV FDIFLWSVKT GKLLEIISGH EGPVVSIAFS PVATSSTLVS 540
  541 GSWDKTVKIW NCLESNSEHE TIDAVSDVTN VTFSPSGEEI AVATLSGNIT IFDIKSAGQV 600
  601 TTIEGRNDLS AGRLETDIIT ARKNAQANYF STIEYSADGE CILAAGKSAN ICIYHVREAI 660
  661 LLKKFEITQN HSLDGLNDFI SRKHLSEFGN MALVEEREEL EGGRVAIRLP GVQRGDMSSR 720
  721 RFQQEVRVFS VKFSPTGQAF AAAGTEGLCI YALDKGVVFD PFDLSLEVTP KAVHESLKQQ 780
  781 NYTKALVMSL KLNEPNLIAL VLERVPYKDV ELVCADLSPE FAQRLLQQLA RQLQSTPHIE 840
  841 FYLQWSCCLL TKHGNQDGVF QHTGLLALHE VLSRKYEMLN KICDYNKYTL KVLLDRADKL 900
  901 EQKNEGKPNA TEEDSDEEML LIRSKDDENG QAQFSDEEES DSGSEEEMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..291] PSI-BLAST 13.39794 Surface layer protein
    2 View Details [292..380] PSI-BLAST 78.045757 No description for 2gnqA was found.
    3 View Details [381..755] PSI-BLAST 62.0 No description for 2ovpB was found.
    4 View Details [756..862] FFAS03 1.01 Arp2/3 complex 16 kDa subunit ARPC5
    5 View Details [863..949] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.90408871052739 bayes_pls_golite062009
  • protein binding
    		•  1.47118967208188 bayes_pls_golite062009
  • catalytic activity
    		•  0.233388920718075 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • actin binding
    		•  3.96142804508726 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.76395120646404 bayes_pls_golite062009
  • structural molecule activity
    		•  2.17187341307284 bayes_pls_golite062009
  • binding
    		•  2.04387193075129 bayes_pls_golite062009
  • protein binding
    		•  1.73247596111443 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.64604432655515 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle