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Protein Overview: mms4-PA

General Information:
Name(s) found: mms4-PA / FBpp0087317 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\mms4 (CG12936, FBgn0033549). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6698599..6699729. It has the cytological map location 47C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; nuclease activity; DNA binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: DNA metabolic process. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA metabolic process [IEA]
    Molecular Function: DNA binding [IEA]
    protein binding [IEA]
    nuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKVDKLHK QALREQQKRI KPGECMKYVR MVIDAGFLGI PVGQEALQQL NATGLKYEIR  60
   61 SLPVSHCILW ERNVGQQTIA LGSSPTGLDE AWKSENQVVQ WLSESSFQRA VKDQSLVCLG 120
  121 PRLQDSFPDC QYTIALPTLR HSKHGSSSSQ DALIEMQLLQ ELHVEQLDQP ESQDLVALLQ 180
  181 RYTKAIAEAP YKKQRNETLG GFKKYLANDK KQCVRVDQGN GYGRLWQQHL NRLPMVTLEV 240
  241 AESIIAQYPC PKKLIDHFSS DPLAVQSLAD LKIKRCNGPQ PLHTERRIGN VLSNKLYTLY 300
  301 TAKDPNTLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 8.39794 XPF from Aeropyrum pernix, complex with DNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.286388432783973 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle