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Protein Overview: CAP-PD

General Information:
Name(s) found: CAP-PD / FBpp0087434 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene CAP is referred to in FlyBase by the symbol Dmel\CAP (CG18408, FBgn0033504). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6156528..6194529. It has the cytological map location 46F9-47A1. Based on sequence similarity, it is predicted to have molecular function</span>: vinculin binding. The biological processes in which it is involved are not known. 23 alleles are reported. No phenotypic data is available. It has 17 annotated transcripts and 17 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: focal adhesion [ISS]
    Biological Process: NONE FOUND
    Molecular Function: vinculin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHQTLAPHR SKSSSYSKSK AVHWRQKLHS SCNDLELEDE PFPEPQGMWH SQEINENPWQ  60
   61 RPQSSGADGS SNNNVCDIPN CGKILWIHRR EYDYNRSAPL RPPSPSNYHG VPSAVGYHVV 120
  121 GLPLTPQPNQ RQAYLANQHA IGATMPLLLW QQQQQLLQQQ RQHQQNLQQL QHRKYQNMQH 180
  181 RWPSNVNIHF KTPIRHEQRQ NLSEEELAIR QAEHMQKLYH EERRRKYLQE LQDMNSRRHT 240
  241 DNFTPSQKSP IALNRYDDFP TDVTLKSLVG PKTVARALFN FQGQTSKELS FRKGDTIYIR 300
  301 RQIDANWYEG EHNAMIGLLP ASYVEIVSRD GARTPSKRPS EGQARAKYNF QAQSGIELSL 360
  361 NKGELVTLTR RVDGNWFEGK IANRKGIFPC SYVEVLTDIG AEDIAARTTT VITSQSTTNL 420
  421 RPNLDVLRTN INNEFNTLTQ NGAQPPNGIL KETRTLHKTD ALHVDTSSEP LAYRALYKYR 480
  481 PQNSDELELL EGDVVHVLEK CDDGWFVGTS QRTGCFGTFP GNYVERA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] deduced N/A No confident structure predictions are available.
    2 View Details [72..272] deduced N/A No confident structure predictions are available.
    3 View Details [273..527] PSI-BLAST 32.09691 Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains; Growth factor receptor-bound protein 2 (GRB2)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle