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Protein Overview: sec24-PA, FBpp03...

General Information:
Name(s) found: FBpp0308496 [FlyBase]
sec24-PA / FBpp0087536 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=2R:complement(5764631..5764742,5764806..5764944,5764998..5765095,5765149..5765381,5765437..5766059,5766164..5766389,5766449..5766948,5767013..5767139,5767201..5768697); ID=FBpp0308496; name=Sec24AB-PB; parent=FBgn0033460,FBtr0339406; dbxref=FlyBase:FBpp0308496,FlyBase_Annotation_IDs:CG1472-PB; MD5=027fca445b7a3bda5c488f5f9fa3aa76; length=1184; release=r5.56; species=Dmel; [FlyBase]
  • The gene sec24 is referred to in FlyBase by the symbol Dmel\sec24 (CG1472, FBgn0033460). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5763730..5769858. It has the cytological map location 46C1-46C2. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: ER to Golgi vesicle-mediated transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1184 amino acids

    Gene Ontology:
    Cellular Component: ER to Golgi transport vesicle [ISS]
    COPII vesicle coat [IEA]
    Biological Process: ER to Golgi vesicle-mediated transport [ISS]
    intracellular protein transport [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTYNPNFVP PAHAPMPLNG NNFVNGVQGS VQQQPGPPPG QQYIPQKQPQ QFQQPPPAAA  60
   61 FPGAGAPGNV PPPQQFNSGI TNQFLPPTSG AATPLQQLPP STLPPHLRPP AANGPPLTNG 120
  121 SNGASSANSS RTASPRPVGA APQYAQGPIA AALNNPPLAS GLRPSPQPTH QSLANLTSNL 180
  181 ENLNLNTTRA NGGTSILPQP QTQQQYAPTV TQKDGRGVAS AQTGPPQFND ANSLLAASGV 240
  241 AAALVPNAMA TPFSGQKPPN LAPNPAKMFG SASMAGRPTP AGQRIPYGVP PPTNPEQQSQ 300
  301 QNNNLQNAPP PPRVGAVWPP SLPNVAAPGA QPMMPPAQQT PQTYPYSQVY QPGPQQQPPP 360
  361 PQSAVQPPPP GMFGTQPTGA PLQYQAQAPP QAYGQHPQQA PQTAPGGPYG TTAPLNVAQQ 420
  421 GFSRLWGQDT IDLMQNRHIL TPATLPPPKV VLHNQFHESI NCSPSIMRCT LTKIPESNSL 480
  481 LQKSRLPLGI VIHPFRDVNS LPVIQCINIV RCRLCRTYIN PFVYFVDSKM WKCNLCYRVN 540
  541 ELPDDFQFDP ATKTYGDVTR RPEVRSSTIE FIAPSEYMLR PPQPAMYLFL FDVSIIAQQS 600
  601 GYLEAACAVL NRHLDEMPGD ARTQVGFICF DSFVHFYSMA EGLNQPHEMT LLDIEDPFLP 660
  661 RPDSLLVNLK ECKELVRDLL KQLPKRFAHT HDPGSALGAA LQVAFKLMQA SGGRITVFQS 720
  721 CLPNKGPGAL EPREDPNNRS AKDVAHLNPA TDFYKRFALE CSGYQIACDL FLMNQQYSDM 780
  781 ATISGISKHS GGCVHHFPLY QKTKPHMVES FRSCFKRYLT RKIGFEAVMR IRCTRGLQVH 840
  841 TFHGNFFVRS TDLLSLPNVN PDAGYGMQIS YEESLTDAKT ICFQAALLYT NSEGERRIRV 900
  901 HTVCLPVTAS LPEVMHSADT EAIIGLLSKM AVDRSVASNL SDARDAFINA TIDVYNAFKI 960
  961 AQNLPSGQSG QLIAPRSLAL LPLYILALLK HPAFRVGTST RLDDRVYAMD CMKTLPLDQL1020
 1021 MKYVYPELYK IDALIYHARN SNISSNQDDD EDEDEPLPEL PRLQLSAEHL DSRSIFLMDC1080
 1081 GTLIMIYVGL NVPPDVLEAV LGISSTAELG DYVYGLPNVV SNENDVLKRF ILRLNYDKPY1140
 1141 SALVQIIRDT STAKGQFTER LTDDRSESSL SYYEFLQHIR AQVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..443] PSI-BLAST 43.221849 No description for 1y0fB was found.
    2 View Details [444..1184] PSI-BLAST 1000.0 No description for 2nupB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle