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Protein Overview: CG1671-PA

General Information:
Name(s) found: CG1671-PA / FBpp0087461 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1671 (CG1671, FBgn0033454). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5735566..5738323. It has the cytological map location 46B4. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: rRNA processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 787 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IEA]
    Biological Process: rRNA processing [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGISEKSY AAEARYTNFY AGGDIAWSPN GHHLYCLNGS AVNQVDVQTS QILNSYGLSS  60
   61 PSADNKRPAE LDNIDVEEDT ITCFGLSQEH LVTAHRSGLL RLWQLDTGKL VKLWKAQHKG 120
  121 PVIRVEFSPC GRLICTSGGA DATLRLWDYS NNSCLGALKD FPGPAWLLVF HPNVLRKEIY 180
  181 AGGSDNTVYA WNYETKTLVH KMRGHLSQVT GLSFKSNASD CNEIVTVSRD KVMIVWQLQE 240
  241 QLESKQLKVL PLYDELEGVV YADEGQLIIV ASGSGKLQQV DPKSWKIRDI LSQSDFQISR 300
  301 LLHCSELKQL ALVTTEQNIL VYDVETLEPI KHLVGYNDEI LDMCFMGEHD RYLAVATNSK 360
  361 HFKLYDTEHD MNCKLIVGHS DTVMSLAASQ NLLISVGKDC SVRLWRLQHD KDCSLEALTQ 420
  421 QANCHTSTIG CVAMTHNGAT GFASVSQDGS MKVWQLVRSK EDRNSYSFNL RYAALSHDKE 480
  481 VNCVAYAPNN KLIATASQDK TAKVWLAESN TLQGVLRGHT RGVWSVRFSP VDQIVLTSSS 540
  541 DCTLRIWSIS NFSCIKRFDQ ECTILRAEFL DHGKFIISAA SDGLLKLWNI KTNTCLQSLD 600
  601 EHNDRVWALA VSARSNRFFY TGGADSKLIR FGDVTQVTRN EALDKRQAAL EQEQTLHSLL 660
  661 HAQKQLHKAF VLALNLDKPK ASFDIINHFV RKRDEPGLRQ LVDQLNVDQR VALLQHVKAW 720
  721 TTNSRHSQAG NMILKYLIGD ALLDPKARFY YNGNMVEVLT PYVQRHFKRV TELNKDLAFL 780
  781 EFIVKCM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 68.045757 No description for 2gnqA was found.
    2 View Details [251..589] PSI-BLAST 27.69897 No description for 2qxvA was found.
    3 View Details [590..686] PSI-BLAST 71.221849 No description for 2ovpB was found.
    4 View Details [687..787] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle