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Protein Overview: FBpp0308498, CG1...

General Information:
Name(s) found: FBpp0308498 [FlyBase]
CG1599-PA / FBpp0088416 [FlyBase]
Description(s) found:
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  • gi|7303846|gb|AAF58892.1| CG1599 [Drosophila melanogaster] [NCBI NR]
  • gi|19921940|ref|NP_610524.1| CG1599 [Drosophila melanogaster] [NCBI NR]
  • gi|17946573|gb|AAL49317.1| RH15778p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(5728699..5728854,5728913..5728980,5729045..5729273,5729352..5729555); ID=FBpp0308498; name=Vamp7-PB; parent=FBgn0266186,FBtr0339408; dbxref=FlyBase:FBpp0308498,FlyBase_Annotation_IDs:CG1599-PB; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1599 (CG1599, FBgn0033452). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5728579..5730014. It has the cytological map location 46B4. It is reported to have molecular function</span>: SNAP receptor activity. It is reported to be involved in the biological process</span>: intracellular protein transport. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG1599-PA translation from_gene[CG1599 CG1599 FBgn0033452] seq_release:3 mol_weight=24942 cds_boundaries:(2R:4,901,830..4,902,683[-]) aa_length:218 transcript_info:[CG1599-RA seq_release:3] gene_info:[gene symbol:CG1599 FBgn0033452 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V5C3) CG1599 protein (RH15778p) [DrosMelano7227.FASTAC.txt]
  • (AE003832) CG1599 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG1599-PA [Drosophila melanogaster]gi|17946573|gb|AAL49317.1| RH15778p [Drosophila melanogaster]gi|19921940|ref|NP_610524.1| CG1599-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(5728699..5728854,5728913..5728980,5729045..5729273,5729352..5729555); ID=FBpp0088416; name=CG1599-PA; parent=FBgn0033452,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ: [fly-100309-contam.fasta]
  • CG1599-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RH15778p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(5728699..5728854,5728913..5728980,5729045..5729273,5729352..5729555); ID=FBpp0088416; name=CG1599-PA; parent=FBgn0033452,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(5728699..5728854,5728913..5728980,5729045..5729273,5729352..5729555); ID=FBpp0088416; name=CG1599-PA; parent=FBgn0033452,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG1599 OS=Drosophila melanogaster GN=CG1599 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(5728699..5728854,5728913..5728980,5729045..5729273,5729352..5729555); ID=FBpp0088416; name=CG1599-PA; parent=FBgn0033452,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892,FlyMine:FBpp0088416,modMine:FBpp0088416; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG1599 OS=Drosophila melanogaster GN=CG1599 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0088416; name=Vamp7-PA; parent=FBgn0266186,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892,FlyMine:FBpp0088416,modMine:FBpp0088416; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0312219; name=Vamp7-PC; parent=FBgn0266186,FBtr0346639; dbxref=FlyBase:FBpp0312219,FlyBase_Annotation_IDs:CG1599-PC,GB_protein:AHN56053,REFSEQ:NP_001286255; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0088416; name=Vamp7-PA; parent=FBgn0266186,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892,FlyMine:FBpp0088416,modMine:FBpp0088416; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0312219; name=Vamp7-PC; parent=FBgn0266186,FBtr0346639; dbxref=FlyBase:FBpp0312219,FlyBase_Annotation_IDs:CG1599-PC,GB_protein:AHN56053,REFSEQ:NP_001286255; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • RH15778p OS=Drosophila melanogaster GN=Vamp7 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0088416 type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0088416; name=Vamp7-PA; parent=FBgn0266186,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892,FlyMine:FBpp0088416,modMine:FBpp0088416; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0312219 type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0312219; name=Vamp7-PC; parent=FBgn0266186,FBtr0346639; dbxref=FlyBase:FBpp0312219,FlyBase_Annotation_IDs:CG1599-PC,GB_protein:AHN56053,REFSEQ:NP_001286255; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0088416; name=Vamp7-PA; parent=FBgn0266186,FBtr0089394; dbxref=FlyBase:FBpp0088416,FlyBase_Annotation_IDs:CG1599-PA,GB_protein:AAF58892.1,REFSEQ:NP_610524,GB_protein:AAF58892,UniProt/TrEMBL:Q7JYX5,FlyMine:FBpp0088416,modMine:FBpp0088416; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(9841847..9842050,9841540..9841768,9841408..9841475,9841194..9841349)); ID=FBpp0312219; name=Vamp7-PC; parent=FBgn0266186,FBtr0346639; dbxref=FlyBase:FBpp0312219,FlyBase_Annotation_IDs:CG1599-PC,GB_protein:AHN56053,REFSEQ:NP_001286255,UniProt/TrEMBL:Q7JYX5; MD5=af2bfe8ee063ec4f17584ee207377b9f; length=218; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    plasma membrane [ISS]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IC]
    Molecular Function: SNAP receptor activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILYSVISR GTTVLAKFAE CVGNFAEVTE HIIGRIGVHN HKMTYTHGDY LIHYTCENKL  60
   61 VYMCITDNEF ERSRAFLFLA DIKQKFIQTY GLQVATAIAY SMNTEFSKIL AQQMVYFSQS 120
  121 REVDTISRVH GQIDELKDIM VKNIDSLRDR GEKLELLVNK TENLSNNSVA FRKASRNLAR 180
  181 QMFWKNIRVY VVVGLVITFI VYVIVSMACG GLAWQSCV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 34.39794 No description for 2dmwA was found.
    2 View Details [118..218] PSI-BLAST 18.522879 Synaptobrevin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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