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Protein Overview: CG8235-PA

General Information:
Name(s) found: CG8235-PA / FBpp0087757 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG8235 (CG8235, FBgn0033351). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4814519..4815605. It has the cytological map location 44F8. Based on sequence similarity, it is predicted to have molecular function</span>: aminoacyl-tRNA synthetase auxiliary protein activity. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: aminoacyl-tRNA synthetase multienzyme complex [ISS]
    Biological Process: NONE FOUND
    Molecular Function: aminoacyl-tRNA synthetase auxiliary protein activity [ISS]
    tRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRAATTVG SACKNYGQNC SKFARNKRTM ADLQQIASNN ERAEALINSI EAEISGIQQQ  60
   61 LVERQKQELI KENAALAKEV EAALAQLVQL ELRNGKKQIP VPGARGFCTS AAPVVMPAEA 120
  121 GPATAAPAAP APKPAKEPKE KKSKEKKPAA EKPAAAPEAP VDVGRLDLRV GKIVEVGRHP 180
  181 DADSLYLEKI DCGEAAPRTV VSGLVKFVPL EEMQNRLVVV MCNLKPAKMR GVTSEAMVMC 240
  241 ASTPEKVEVL SPPAGAVPGD LVHCEGYPRQ PDAQLNPKKK IFESCAPDLK TNGELVACYK 300
  301 GAALHVPGKG NVVAQTLKNV NVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 46.0 Methionyl-tRNA synthetase from Pyrococcus abyssi
    2 View Details [274..323] PSI-BLAST 47.0 EMAP II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  1.2614046341353 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  1.1325271210374 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  1.13081231655543 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  1.13081231655543 bayes_pls_golite062009
  • binding
    		•  1.12496911405027 bayes_pls_golite062009
  • protein binding
    		•  0.341429946042706 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle