YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: sec31-PB

General Information:
Name(s) found: sec31-PB / FBpp0087724 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|24651897|ref|NP_724716.1| sec31, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|21645562|gb|AAM71085.1| sec31, isoform B [Drosophila melanogaster] [NCBI NR]
  • The gene sec31 is referred to in FlyBase by the symbol Dmel\sec31 (CG8266, FBgn0033339). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4781129..4786303. It has the cytological map location 44F3. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG8266-PB translation from_gene[CG8266 sec31 FBgn0033339] seq_release:3 mol_weight=136141 cds_boundaries:(2R:3,954,692..3,959,321[+]) aa_length:1241 transcript_info:[CG8266-RB seq_release:3] gene_info:[gene symbol:sec31 FBgn0033339 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MKS2) CG8266-PB [DrosMelano7227.FASTAC.txt]
  • CG8266-PB, isoform B [Drosophila melanogaster]gi|24651897|ref|NP_724716.1| CG8266-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(4781450..4781646,4781709..4782672,4782735..4782978,4783037..4783149,4783456..4783558,4783709..4785135,4785200..4785307,4785370..4785678,4785756..4785827,4785894..4786082); ID=FBpp0087724; name=sec31-PB; parent=FBgn0033339,FBtr008 [fly-100309-contam.fasta]
  • CG8266-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • sec31 CG8266-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(4781450..4781646,4781709..4782672,4782735..4782978,4783037..4783149,4783456..4783558,4783709..4785135,4785200..4785307,4785370..4785678,4785756..4785827,4785894..4786082); ID=FBpp0087724; name=sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(4781450..4781646,4781709..4782672,4782735..4782978,4783037..4783149,4783456..4783558,4783709..4785135,4785200..4785307,4785370..4785678,4785756..4785827,4785894..4786082); ID=FBpp0087724; name=sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Sec31, isoform B OS=Drosophila melanogaster GN=sec31 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(4781450..4781646,4781709..4782672,4782735..4782978,4783037..4783149,4783456..4783558,4783709..4785135,4785200..4785307,4785370..4785678,4785756..4785827,4785894..4786082); ID=FBpp0087724; name=sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085,FlyMine:FBpp0087724,modMine:FBpp0087724; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Sec31, isoform B OS=Drosophila melanogaster GN=sec31 PE=4 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2R:join(8893945..8894141,8894204..8895167,8895230..8895473,8895532..8895644,8895951..8896053,8896204..8897630,8897695..8897802,8897865..8898173,8898251..8898322,8898389..8898577); ID=FBpp0087724; name=Sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085,FlyMine:FBpp0087724,modMine:FBpp0087724; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(8893945..8894141,8894204..8895167,8895230..8895473,8895532..8895644,8895951..8896053,8896204..8897630,8897695..8897802,8897865..8898173,8898251..8898322,8898389..8898577); ID=FBpp0087724; name=Sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085,FlyMine:FBpp0087724,modMine:FBpp0087724; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4LEZ1, Sec31 ortholog, isoform B OS=Drosophila melanogaster GN=Sec31 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0087724 type=protein; loc=2R:join(8893945..8894141,8894204..8895167,8895230..8895473,8895532..8895644,8895951..8896053,8896204..8897630,8897695..8897802,8897865..8898173,8898251..8898322,8898389..8898577); ID=FBpp0087724; name=Sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085,FlyMine:FBpp0087724,modMine:FBpp0087724; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(8893945..8894141,8894204..8895167,8895230..8895473,8895532..8895644,8895951..8896053,8896204..8897630,8897695..8897802,8897865..8898173,8898251..8898322,8898389..8898577); ID=FBpp0087724; name=Sec31-PB; parent=FBgn0033339,FBtr0088643; dbxref=FlyBase:FBpp0087724,FlyBase_Annotation_IDs:CG8266-PB,GB_protein:AAM71085.1,REFSEQ:NP_724716,GB_protein:AAM71085,UniProt/TrEMBL:A1Z7J6,FlyMine:FBpp0087724,modMine:FBpp0087724; MD5=d0ea44f1e0ee70fa87f4075f3d034acf; length=1241; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1241 amino acids

    Gene Ontology:
    Cellular Component: synaptic vesicle [ISS]
    ER to Golgi transport vesicle [TAS]
    endoplasmic reticulum [IDA]
    Golgi stack [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKELQKTV NIAWSPAQQQ QILLAAGTAA QQFDSNANST LELYSPNFSD ATYDLELRAS  60
   61 VSSQYKFQKL IWSPVGPHPS GLIVGGCEAG QINIYSADKL LAGKEEPLLK RQDKHTGAVS 120
  121 GLDFNPFQNN LLASCASESE ILIWDLNNPE TSMSPGTKTQ PLEDVKNVAW NRQVQHILAS 180
  181 VFSTRCVIWD LRKSQQIIKL SDSQSRVRWH AIEWHPEAAT QVWLASEDDQ APVVQLWDLR 240
  241 YATAPAKTYQ IHERGVLGMS WCLQDNDLMV SCGKDNRIYC WNPNTKIPEG EILSEVATTA 300
  301 SWYSDVQFCP RNPALIASAS LEGAVSIYSL HGGTHHLVQT ANKIADSFPG MDQFAQEPIP 360
  361 QQATQVVYHD LAHAPKWMKR PCGVAFGFGG KLVSFNGTSK TVKVQQLTTE SALVDRANAL 420
  421 ERSLVDANYS DYCRQRADET PDQHGRYIWY FIKANFELNP KEEMLNLLGY NKDDIDSKFN 480
  481 KFIKETDGNS HSDVDTLTTR ISTLTHQTQD NKFDGNAIDS QNHNDFATPP RPQFKVPSGD 540
  541 HSDSLIAEAI LTGNVDAAVE LCLEAQRIPE ALIIASTAGI ETLNRTQTRY LLQQKNELSH 600
  601 VISALVSRDW LDFVNRCTVD SWKEALVAAL KHSERKVVDI CERLGDRLLS ECASSAEFTR 660
  661 NAMLCYICAG SIDKLVTAWY QLKRLEQQNP GYKPNTTELQ DLAEMVMLMC KSLEQQGISV 720
  721 DLAGRFAGFL TEYGGLLASQ GALTAALQYI TTLGGGAAAS ESDVLQSLRD RINNAVNLDY 780
  781 TQPQAAVAAA PHGYQPTRGR GSFSQPQPSA PMPYGQPPNQ YAQPSWPAQV PPLQTSYPGA 840
  841 QQPQAPPQIF NPQPVKPEPL AQPPRPLSNA SSSGGPPPAG GASSSGGSGL SGRSKYVLDP 900
  901 SVAAPTSSYG MPYNPVPAPV PSAVPFGGGG VPGPAPQPAS VPTYNSNAFN TNPIAAAQPY 960
  961 NPSPLMPAQQ NQFVPGVNPI ETMPPPAVPP VIQNVQRNPT PPPGWNDPPA LKSSRAPKPK1020
 1021 PVVEPSAAIF HPLFPVDPNQ NQNGYVDPSQ YQHAAPLGGV PNTYYNPAAF NNNPQQQQQH1080
 1081 QQSYLQPQQP APGIQQPNWQ GQQQTIGYTE QPAPIQQQRQ PAPPKEKPPL PEEYIYLQTV1140
 1141 LEELKNRCLG ATNDPRTKRK FVDVVKRLEN LYDCLRDGKL TPTTVQYLNQ IVQYIQISDY1200
 1201 ANAMEIHTQI AFGTDFAQCA GFMQGLKVLL QSASELQLVL R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 56.221849 No description for 2pm9A was found.
    2 View Details [399..536] PSI-BLAST 10.69897 High resolution S. cerevisiae Bub3 mitotic checkpoint protein
    3 View Details [537..752] FFAS03 5.85 No description for 2pm6A was found.
    4 View Details [753..1156] PSI-BLAST 19.30103 No description for 1y0fB was found.
    5 View Details [1157..1241] FFAS03 1.01 Functional domain of the splicing factor Prp18


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle