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Protein Overview: CG12780-PA

General Information:
Name(s) found: CG12780-PA / FBpp0087815 [FlyBase]
Description(s) found:
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  • gi|7304037|gb|AAF59079.1| CG12780 [Drosophila melanogaster] [NCBI NR]
  • gi|24586607|ref|NP_610388.1| CG12780 [Drosophila melanogaster] [NCBI NR]
  • gi|119115872|emb|CAJ18890.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115870|emb|CAJ18889.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115868|emb|CAJ18888.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115864|emb|CAJ18886.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115862|emb|CAJ18885.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115860|emb|CAJ18884.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115858|emb|CAJ18883.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115856|emb|CAJ18882.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115854|emb|CAJ18881.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • gi|119115852|emb|CAJ18880.1| CG12780 protein [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12780 (CG12780, FBgn0033301). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4439456..4439758. It has the cytological map location 44D2. Based on sequence similarity, it is predicted to have molecular function</span>: Gram-negative bacterial binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12780-PA translation from_gene[CG12780 CG12780 FBgn0033301] seq_release:3 mol_weight=11494 cds_boundaries:(2R:3,612,701..3,613,000[-]) aa_length:100 transcript_info:[CG12780-RA seq_release:3] gene_info:[gene symbol:CG12780 FBgn0033301 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V4U6) CG12780 protein [DrosMelano7227.FASTAC.txt]
  • (AE003836) CG12780 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG12780-PA [Drosophila melanogaster]gi|24586607|ref|NP_610388.1| CG12780-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(4439456..4439758); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079; MD5=d578bb49a78929 [fly-100309-contam.fasta]
  • CG12780-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(4439456..4439758); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(4439456..4439758); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG12780 OS=Drosophila melanogaster GN=CG12780 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(4439456..4439758); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079,FlyMine:FBpp0087815,modMine:FBpp0087815; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(8551951..8552253); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079,FlyMine:FBpp0087815,modMine:FBpp0087815; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(8551951..8552253); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079,FlyMine:FBpp0087815,modMine:FBpp0087815; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087815 type=protein; loc=2R:complement(8551951..8552253); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079,FlyMine:FBpp0087815,modMine:FBpp0087815; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(8551951..8552253); ID=FBpp0087815; name=CG12780-PA; parent=FBgn0033301,FBtr0088736; dbxref=GB_protein:AAF59079.1,FlyBase:FBpp0087815,FlyBase_Annotation_IDs:CG12780-PA,REFSEQ:NP_610388,GB_protein:AAF59079,UniProt/TrEMBL:A0ZWY4,FlyMine:FBpp0087815,modMine:FBpp0087815; MD5=d578bb49a7892989fa420e4fa271c82e; length=100; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 100 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: Gram-negative bacterial cell surface binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGYQVPLAR VTSSERRGFE VSIDDEPGIS LFGFHGRLNE PIVDLGNQTW AADIIGKDKD  60
   61 GRWTYTNRDV ELKDGDVLYY WTTVRYNGRD YHRMNQSAGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle