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Protein Overview: Lcp2-PA, FBpp0305734

General Information:
Name(s) found: FBpp0305734 [FlyBase]
Lcp2-PA / FBpp0087840 [FlyBase]
Description(s) found:
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  • pir||B25299 cuticle protein II precursor - fruit fly (Drosophila melanogaster) [NCBI NR]
  • gi|459437|emb|CAA23488.1| cuticle II [Drosophila melanogaster] [NCBI NR]
  • gi|17136298|ref|NP_476620.1| larval cuticle protein 2 [Drosophila melanogaster] [NCBI NR]
  • gi|117634|sp|P07187.1|LCP2_DROME RecName: Full=Larval cuticle protein 2; AltName: Full=Larval cuticle protein II; Flags: Precursor [NCBI NR]
  • gi|10727726|gb|AAF59095.2| larval cuticle protein 2 [Drosophila melanogaster] [NCBI NR]
  • Larval cuticle protein 2 OS=Drosophila melanogaster GN=Lcp2 PE=1 SV=1 [Swiss-Prot]
  • type=protein; loc=2R:complement(4321596..4321964,4322027..4322038); ID=FBpp0305734; name=Lcp2-PB; parent=FBgn0002533,FBtr0333556; dbxref=REFSEQ:NP_001260802,GB_protein:AGB93335,FlyBase:FBpp0305734,FlyBase_Annotation_IDs:CG8697-PB; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r5.56; species=Dmel; [FlyBase]
  • The gene Larval cuticle protein 2 is referred to in FlyBase by the symbol Dmel\Lcp2 (CG8697, FBgn0002533). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4321472..4322080. It has the cytological map location 44C6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle. The biological processes in which it is involved are not known. 10 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG8697-PA translation from_gene[CG8697 Lcp2 FBgn0002533] seq_release:3 mol_weight=13488 cds_boundaries:(2R:3,494,841..3,495,280[-]) aa_length:126 transcript_info:[CG8697-RA seq_release:3] gene_info:[gene symbol:Lcp2 FBgn0002533 gene_boundaries:(2R:3,4 [hmr_yeast5_DM3-1_pombe.fasta]
  • (P07187) Larval cuticle protein II precursor [DrosMelano7227.FASTAC.txt]
  • (AE003837) Lcp2 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG8697-PA [Drosophila melanogaster]gi|17136298|ref|NP_476620.1| CG8697-PA [Drosophila melanogaster]gi|459437|emb|CAA23488.1| cuticle II [Drosophila melanogaster]gi|85224|pir||B25299 cuticle protein II precursor - fruit fly (Drosophila melanogaster)gi| [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(4321596..4321964,4322027..4322038); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095; MD5=0 [fly-100309-contam.fasta]
  • cuticle II [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Larval cuticle protein 2 CG8697-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG8697-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Larval cuticle protein 2 precursor (Larval cuticle protein II) [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(4321596..4321964,4322027..4322038); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(4321596..4321964,4322027..4322038); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:complement(4321596..4321964,4322027..4322038); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095,FlyMine:FBpp0087840,modMine:FBpp0087840; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(4321596..4321964,4322027..4322038); ID=FBpp0305734; name=Lcp2-PB; parent=FBgn0002533,FBtr0333556; dbxref=FlyBase:FBpp0305734,FlyBase_Annotation_IDs:CG8697-PB; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095,FlyMine:FBpp0087840,modMine:FBpp0087840; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0305734; name=Lcp2-PB; parent=FBgn0002533,FBtr0333556; dbxref=REFSEQ:NP_001260802,GB_protein:AGB93335,FlyBase:FBpp0305734,FlyBase_Annotation_IDs:CG8697-PB; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0305734; name=Lcp2-PB; parent=FBgn0002533,FBtr0333556; dbxref=REFSEQ:NP_001260802,GB_protein:AGB93335,FlyBase:FBpp0305734,FlyBase_Annotation_IDs:CG8697-PB; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095,FlyMine:FBpp0087840,modMine:FBpp0087840; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P07187, Larval cuticle protein 2, isoform B OS=Drosophila melanogaster GN=Lcp2 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0087840 type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095,FlyMine:FBpp0087840,modMine:FBpp0087840; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305734 type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0305734; name=Lcp2-PB; parent=FBgn0002533,FBtr0333556; dbxref=REFSEQ:NP_001260802,GB_protein:AGB93335,FlyBase:FBpp0305734,FlyBase_Annotation_IDs:CG8697-PB; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0087840; name=Lcp2-PA; parent=FBgn0002533,FBtr0088761; dbxref=FlyBase:FBpp0087840,FlyBase_Annotation_IDs:CG8697-PA,GB_protein:AAF59095.2,REFSEQ:NP_476620,GB_protein:AAF59095,UniProt/Swiss-Prot:P07187,FlyMine:FBpp0087840,modMine:FBpp0087840; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(8434522..8434533,8434091..8434459)); ID=FBpp0305734; name=Lcp2-PB; parent=FBgn0002533,FBtr0333556; dbxref=REFSEQ:NP_001260802,GB_protein:AGB93335,FlyBase:FBpp0305734,FlyBase_Annotation_IDs:CG8697-PB,UniProt/Swiss-Prot:P07187; MD5=0ba14fb30744c38d0d982f8923f56543; length=126; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 126 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of chitin-based larval cuticle [NAS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKFVMILAV VGVATALAPV SRSDDVHADV LSRSDDVRAD GFDSSLHTSN GIEQAASGDA  60
   61 HGNIHGNFGW ISPEGEHVEV KYVANENGYQ PSGAWIPTPP PIPEAIARAV AWLESHPPAP 120
  121 EHPRHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] Pfam 23.376751 No description for PF00379.14 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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