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Protein Overview: Odc1-PA

General Information:
Name(s) found: Odc1-PA / FBpp0087939 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene Ornithine decarboxylase 1 is referred to in FlyBase by the symbol Dmel\Odc1 (CG8721, FBgn0013307). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3892308..3894178. It has the cytological map location 44A2. Based on sequence similarity, it is predicted to have molecular function</span>: ornithine decarboxylase activity. It is reported to be involved in the biological process</span>: polyamine biosynthetic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: polyamine biosynthetic process [IEA][NAS]
    Molecular Function: ornithine decarboxylase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATPEIQF YERELNIRRV IEECDLQRLD QALNICDLSS VERKLRLWQK LLPRIKPFYA  60
   61 VKCNDDPMVV RLLAQLGAGF DCASKNEVKL VLGFDVSPER IIFANPCRPV SHLEYAKEHQ 120
  121 VSNGTVDNEF EVYKLHTHYP NSNLIVRFKS EAKEAQCPLG DKFGCDADVD AAALMLLAKS 180
  181 LELKVTGTSF HVGSGCSELQ AYDRAIKKAK NLFKFGALLG YDMDFLDIGG GFPGSDDVKF 240
  241 EKIAESVNTS VQRHFPDERV HIIAEPGRFF VAAACTLVCK IHAKREIRNE AGKLDTVMYY 300
  301 LNDGVYGSFN CILYDHQVVI AEHYLDNAES LPHLKSLIWG PSCDALDKIS EDLHLPNLNR 360
  361 GDLLGFRNMG AYTMPIASAF NGFEVPKTLY FQAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 91.0 No description for 2oo0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle