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Protein Overview: phr-PA

General Information:
Name(s) found: phr-PA / FBpp0087914 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene photorepair is referred to in FlyBase by the symbol Dmel\phr (CG11205, FBgn0003082). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3712997..3714824. It has the cytological map location 43E18. Based on sequence similarity, it is predicted to have molecular function</span>: deoxyribodipyrimidine photo-lyase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: DNA repair. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [ISS]
    Molecular Function: deoxyribodipyrimidine photo-lyase activity [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTLASYWRE SFKIVLPLQA MKRTKAQKAG PSKKAAKNEK ASSEPKSDQE SSDEEASTSK  60
   61 ALLVSKPDYQ NFEQFLTHLE HQRVCTAANI QEFSFRKKRV RVLSKTEDVK ESSLGGVVYW 120
  121 MSRDGRVQDN WALLFAQRLA LKLELPLTVV FCLVPKFLNA TIRHYKFMMG GLQEVEQQCR 180
  181 ALDIPFHLLM GSAVEKLPQF VKSKDIGAVV CDFAPLRLPR QWVEDVGKAL PKSVPLVQVD 240
  241 AHNVVPLWVA SDKQEYAART IRNKINSKLG EYLSVFPPVV RHPHGTGCKN VNTVDWSAAY 300
  301 ASLQCDMEVD EVQWAKPGYK AACQQLYEFC SRRLRHFNDK RNDPTADALS GLSPWLHFGH 360
  361 ISAQRCALEV QRFRGQHKAS ADAFCEEAIV RRELADNFCF YNEHYDSLKG LSSWAYQTLD 420
  421 AHRKDKRDPC YSLEELEKSL TYDDLWNSAQ LQLVREGKMH GFLRMYWAKK ILEWTATPEH 480
  481 ALEYAILLND KYSLDGRDPN GYVGCMWSIG GVHDMGWKER AIFGKVRYMN YQGCRRKFDV 540
  541 NAFVMRYGGK VHKKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..555] PSI-BLAST 79.69897 No description for 2ijgX was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle