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Protein Overview: CG1600-PC

General Information:
Name(s) found: CG1600-PC / FBpp0088031 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1600 (CG1600, FBgn0033188). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3413623..3420487. It has the cytological map location 43D2-43D3. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: oxidoreductase activity; zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: response to hypoxia. 6 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to hypoxia [IEP][IMP]
    oxidation reduction [IEA]
    Molecular Function: zinc ion binding [IEA]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVDICSQPH NLLSSMSGTT DTSLSLNSLS LTSVLPPTDP DHHNPHSTHS THNMNKLCRQ  60
   61 VSIESPGPGA KNCVFNFFVP IEDTPALGAR IRIVCAGACY RRRDRANSIT SMSSVSSELS 120
  121 DYCPSVNSMS SPAHQGIREG SFFPGFEVAG VIESLGSEIT EANNRGLRIG QRVIVYPFDE 180
  181 TPAGYAELLV VPDLKHVVPI PDSLPMEVAA MLPTGALLAW NAVFKAQAVV TQILSQRAAT 240
  241 EPKRKPKILI VGTGGLALWA VRIASYHFAT TGADNVDITV ASLRDEGFRL ATEIKNVSVV 300
  301 QWNECLYEPQ LIERTKDVCG GAVDVVIDFG TTSRSLHRSM HCLSKGGVVL ISDEVAEKLL 360
  361 PKFSRLSEQY QQEIIAISNG TAEQLAELVE LVANKKIEPP PHSVFPCEQA AEVIAKLCNS 420
  421 EIPGRAILRF HDIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..434] PSI-BLAST 76.09691 CRYSTAL STRUCTURE OF NAD(+)-DEPENDENT ALCOHOL DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS STRAIN LLD-R

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.934709060730777 bayes_pls_golite062009
  • protein binding
    		•  0.417403352171849 bayes_pls_golite062009
  • catalytic activity
    		•  0.217171374336363 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.207183346839821 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.19043692431495 bayes_pls_golite062009
  • chaperone binding
    		•  0.0365779597193233 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle