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Protein Overview: CG3420-PA, FBpp0...

General Information:
Name(s) found: FBpp0305158 [FlyBase]
CG3420-PA / FBpp0085468 [FlyBase]
Description(s) found:
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  • gi|28573970|ref|NP_610234.3| CG3420 [Drosophila melanogaster] [NCBI NR]
  • gi|28380702|gb|AAM70829.2| CG3420 [Drosophila melanogaster] [NCBI NR]
  • gi|17945905|gb|AAL48998.1| RE40412p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(2643863..2643986,2644048..2644141,2644218..2644362,2644425..2644472); ID=FBpp0305158; name=CG3420-PB; parent=FBgn0033100,FBtr0332940; dbxref=REFSEQ:NP_001260735,GB_protein:AGB93268,FlyBase:FBpp0305158,FlyBase_Annotation_IDs:CG3420-PB; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3420 (CG3420, FBgn0033100). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2643801..2644714. It has the cytological map location 42C8. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: 2 iron, 2 sulfur cluster binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG3420-PA translation from_gene[CG3420 CG3420 FBgn0033100] seq_release:3 mol_weight=15628 cds_boundaries:(2R:1,817,263..1,817,869[-]) aa_length:136 transcript_info:[CG3420-RA seq_release:3] gene_info:[gene symbol:CG3420 FBgn0033100 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8SYQ8) RE40412p (CG3420-PA) [DrosMelano7227.FASTAC.txt]
  • CG3420-PA [Drosophila melanogaster]gi|17945905|gb|AAL48998.1| RE40412p [Drosophila melanogaster]gi|28573970|ref|NP_610234.3| CG3420-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(2643863..2643986,2644048..2644141,2644218..2644362,2644425..2644472); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ: [fly-100309-contam.fasta]
  • RE40412p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3420-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(2643863..2643986,2644048..2644141,2644218..2644362,2644425..2644472); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(2643863..2643986,2644048..2644141,2644218..2644362,2644425..2644472); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG3420 OS=Drosophila melanogaster GN=CG3420 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(2643863..2643986,2644048..2644141,2644218..2644362,2644425..2644472); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829,FlyMine:FBpp0085468,modMine:FBpp0085468; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(2643863..2643986,2644048..2644141,2644218..2644362,2644425..2644472); ID=FBpp0305158; name=CG3420-PB; parent=FBgn0033100,FBtr0332940; dbxref=FlyBase:FBpp0305158,FlyBase_Annotation_IDs:CG3420-PB; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829,FlyMine:FBpp0085468,modMine:FBpp0085468; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0305158; name=CG3420-PB; parent=FBgn0033100,FBtr0332940; dbxref=REFSEQ:NP_001260735,GB_protein:AGB93268,FlyBase:FBpp0305158,FlyBase_Annotation_IDs:CG3420-PB; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829,FlyMine:FBpp0085468,modMine:FBpp0085468; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0305158; name=CG3420-PB; parent=FBgn0033100,FBtr0332940; dbxref=REFSEQ:NP_001260735,GB_protein:AGB93268,FlyBase:FBpp0305158,FlyBase_Annotation_IDs:CG3420-PB; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG3420, isoform A OS=Drosophila melanogaster GN=CG3420 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0085468 type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829,FlyMine:FBpp0085468,modMine:FBpp0085468; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305158 type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0305158; name=CG3420-PB; parent=FBgn0033100,FBtr0332940; dbxref=REFSEQ:NP_001260735,GB_protein:AGB93268,FlyBase:FBpp0305158,FlyBase_Annotation_IDs:CG3420-PB; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0085468; name=CG3420-PA; parent=FBgn0033100,FBtr0086135; dbxref=FlyBase:FBpp0085468,FlyBase_Annotation_IDs:CG3420-PA,GB_protein:AAM70829.2,REFSEQ:NP_610234,GB_protein:AAM70829,UniProt/TrEMBL:Q8SYQ8,FlyMine:FBpp0085468,modMine:FBpp0085468; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(6756920..6756967,6756713..6756857,6756543..6756636,6756358..6756481)); ID=FBpp0305158; name=CG3420-PB; parent=FBgn0033100,FBtr0332940; dbxref=REFSEQ:NP_001260735,GB_protein:AGB93268,FlyBase:FBpp0305158,FlyBase_Annotation_IDs:CG3420-PB,UniProt/TrEMBL:Q8SYQ8; MD5=3ebba03416261f0b23c9f6b94456b8ad; length=136; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 136 amino acids

    Gene Ontology:
    Cellular Component: intracellular membrane-bounded organelle [IEA]
    Biological Process: NONE FOUND
    Molecular Function: 2 iron, 2 sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMILRRNLG ASWLLKACYS SSAKPVDSAK TIPSNLLEDK QTAVLQKENG TIFDKRPFKI  60
   61 HLDKDKTYSW CLCGKSKSQP LCDGMHKNEF LKIKQRPIRF KVEKSGDYWL CNCKQTTHRP 120
  121 FCDGTHKQPH IQSAVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] PSI-BLAST 15.39794 No description for 2qd0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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