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Protein Overview: CE40500

General Information:
Name(s) found: CE40500 [WormBase]
Description(s) found:
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  • WBGene00008346 status:Partially_confirmed UniProt:O45318 protein_id:CAB01138.3 [WormBase]
  • gi|133957891|ref|NP_506358.3| hypothetical protein C56A3.8 [Caenorhabditis elegans] [NCBI NR]
  • gi|116635871|emb|CAB01138.3| C. elegans protein C56A3.8a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE40500 WBGene00008346 status:Partially_confirmed UniProt:O45318_CAEEL protein_id:CAB01138.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40500 WBGene00008346 status:Partially_confirmed UniProt:O45318_CAEEL protein_id:CAB01138.3| [wormORF-contam.fasta]
  • Hypothetical protein C56A3.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE40500 WBGene00008346 status:Partially_confirmed TR:O45318 protein_id:CAB01138.3 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40500 WBGene00008346 status:Partially_confirmed UniProt:O45318 protein_id:CAB01138.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C56A3.8 PE=4 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 402 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: phosphotransferase activity, alcohol group as acceptor [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANSTLSHV GIDSDNESVY DLMSSLEHRK KVDDEFQLVF QKAQEAINKG IQPSLIPEGS  60
   61 SGSYFVYGLE GEIVGVFKPK DEEPFASLNP KWPKFFQRML CFCCFGRACL IPNTGYLSEA 120
  121 AASIVSEMLQ LDVVPTTRIV KLASPSFFYS RFFGHYDVRP KEGSFQLYVN GYESGNTVFA 180
  181 RWNYDKNLLS DEEGAKFQLL FQKMCIVDYV IRNTDRHMDN LLVRHVPGEE INLAAIDNGL 240
  241 AFPVRHPECT SRFRSFPFRW SNLPWAQGEF DPVLRRHVLS LLTPQFVHRL CVDLKKLFRH 300
  301 GIASSNYMLV NSQLRVVRGQ IWNLRQAILA NESPGEMACR DPIIVSRSSD IVMSNPPPPR 360
  361 GMIGLLSSHL ATPNNNSSDV TMKTAIEHEK ENSTVPENLI TL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] MSA 5.07797 View MSA. No confident structure predictions are available.
    2 View Details [144..402] MSA 5.085974 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle