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Protein Overview: vlc-PB

General Information:
Name(s) found: vlc-PB / FBpp0085376 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene vulcan is referred to in FlyBase by the symbol Dmel\vlc (CG8390, FBgn0259978). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:1589612..1592944. It has the cytological map location 41F9-41F8. Its molecular function is unknown. It is reported to be involved in the biological process</span>: imaginal disc-derived leg morphogenesis. 11 alleles are reported. The phenotypes of these alleles are annotated with: metathoracic tarsal segment 2; leg; wing; metathoracic tibia. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: septate junction [ISS]
    Biological Process: imaginal disc-derived leg morphogenesis [NAS]
    cell-cell signaling [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSLDSIGS CSLDVDADSS DISDTSGSLN FPTPVSVRDI TREFTANLRE RCVPNLPPQP  60
   61 QHKTPAYVES RSSELEHMVL SPAIVECDQE PSSNDFDETS AENSQEAPEK KPSYLNLACC 120
  121 VNGYSNLTTY DSKIRQDINK SPTPTLHSMP SPATKCKPIE PNNNSNDSSG NFSSGSGHSN 180
  181 GNGSFIKQRV ERLYGPGALA QGFYSPKKHG QSPSNAAGRS ERGQVEIDSL QGSELARKFK 240
  241 QLSPSKDYGE FRKKMQKKCS QSTTARIDEP LHSPGLNGDL DLPVFRHLSQ EFRAQLPTVS 300
  301 PKRGAPRSCM APDVLLVDNE SSPDHGPTDE VDHESTKMDK LASEEYISTS NISVEAVVKD 360
  361 GNFFLKILKE EQSRLLVLAA LAEKYADALS TNPDISEDTF GLLRSASGKA RLLVSQKMKQ 420
  421 FEGLCHNNLN RSPEDKFPTT LDDLQGFWDM VYLQVEHVDS IFADIEKLKS NDWKVKAQSV 480
  481 ADQPDLHTIP TKTIKPSKVG VSQVKTVGKA SSVRVNGSAP PPPNSAAALK REAQRKLLLE 540
  541 MKRQRREAMT AAAKLNPINV DADPDVPGII GDSCANPSVS NGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] MSA 4.109996 View MSA. No confident structure predictions are available.
    2 View Details [233..399] MSA 4.109982 View MSA. No confident structure predictions are available.
    3 View Details [400..583] MSA 3.05597 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle