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Protein Overview: ref(2)P-PA, ref(...

General Information:
Name(s) found: ref(2)P-PB / FBpp0099683 [FlyBase]
ref(2)P-PA / FBpp0080794 [FlyBase]
Description(s) found:
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  • gi|7298607|gb|AAF53824.1| refractory to sigma P, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|62471647|ref|NP_001014491.1| refractory to sigma P, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|61678313|gb|AAX52671.1| refractory to sigma P, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|20141691|sp|P14199.2|REF2P_DROME RecName: Full=Protein ref(2)P; AltName: Full=Refractory to sigma P [NCBI NR]
  • gi|19528235|gb|AAL90232.1| GH06306p [Drosophila melanogaster] [NCBI NR]
  • gi|17136432|ref|NP_476700.1| refractory to sigma P, isoform A [Drosophila melanogaster] [NCBI NR]
  • (P14199) Ref(2)P protein (Refractory to sigma P) [Swiss-Prot]
  • Protein ref(2)P OS=Drosophila melanogaster GN=ref(2)P PE=1 SV=2 [Swiss-Prot]
  • The gene refractory to sigma P is referred to in FlyBase by the symbol Dmel\ref(2)P (CG10360, FBgn0003231). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:19542446..19545548. It has the cytological map location 37F1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. It is reported to be involved in the biological process</span>: viral infectious cycle. 49 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG10360-PA translation from_gene[CG10360 ref(2)P FBgn0003231] seq_release:3 mol_weight=65304 cds_boundaries:(2L:19,520,900..19,523,382[+]) aa_length:599 transcript_info:[CG10360-RA seq_release:3] gene_info:[gene symbol:ref(2)P FBgn0003231 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003663) ref(2)P gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • GH06306p [Drosophila melanogaster]gi|7298607|gb|AAF53824.1| CG10360-PA [Drosophila melanogaster]gi|17136432|ref|NP_476700.1| CG10360-PA [Drosophila melanogaster]gi|20141691|sp|P14199|RF2P_DROME Ref(2)P protein (Refractory to sigma P) [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_pr [fly-100309-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB [fly-100309-contam.fasta]
  • refractory to sigma P CG10360-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG10360-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG10360-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • refractory to sigma P CG10360-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH06306p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Protein ref(2)P (Refractory to sigma P) [nr-271106-contam.fasta]
  • refractory to sigma P, isoform B [Drosophila melanogaster] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • refractory to sigma P, isoform A [Drosophila melanogaster] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671,FlyMine:FBpp0099683,modMine:FBpp0099683; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671,FlyMine:FBpp0099683,modMine:FBpp0099683; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671,FlyMine:FBpp0099683,modMine:FBpp0099683; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0080794 type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0099683 type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671,FlyMine:FBpp0099683,modMine:FBpp0099683; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0080794; name=ref(2)P-PA; parent=FBgn0003231,FBtr0081253; dbxref=FlyBase_Annotation_IDs:CG10360-PA,FlyBase:FBpp0080794,GB_protein:AAF53824.1,REFSEQ:NP_476700,GB_protein:AAF53824,UniProt/Swiss-Prot:P14199; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(19542817..19542988,19543620..19545101,19545157..19545302); ID=FBpp0099683; name=ref(2)P-PB; parent=FBgn0003231,FBtr0100289; dbxref=FlyBase_Annotation_IDs:CG10360-PB,FlyBase:FBpp0099683,GB_protein:AAX52671.1,REFSEQ:NP_001014491,GB_protein:AAX52671,UniProt/Swiss-Prot:P14199,FlyMine:FBpp0099683,modMine:FBpp0099683; MD5=84e696ba5a5e99cca6d3df66efd78574; length=599; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NAS]
    Biological Process: viral infectious cycle [NAS]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEKLLKITY QGAGPQKKIN AYLRMPSQNY TILRREIELY LFQERQLPKC DVRTFWIDAD  60
   61 KDEIEIVNQN DYEIFLAKCE SNMHVQVAPL APVEEPKATK QEGSSANAEA PSVDDPSNFT 120
  121 IHDAVECDGC GLAPLIGFRY KCVQCSNYDL CQKCELAHKH PEHLMLRMPT NNGPGMVDAW 180
  181 FTGPGLGRRS GRRSRGHCPF QETNQADPAG EPARDSRRER RQARRHAGVL TQFVEMMTNL 240
  241 PLNTTTATAP AEPQKPKAAE QTESPPQAEP TVTAEKAAES EAKPTEPKKV NTDQSVPRTE 300
  301 DPVTTPRSTQ PTTPVINLDN ISQIVPPEYM SAGIEILNNF SEMFSKIIDT TEGGDSGIFA 360
  361 PSTTPSAENK KPEEQGQSSG QSGASSANQS AVPSAAPSAN QSNVPSANQS ATPSISGSIP 420
  421 DAQLETEPLN PKPSETTTET EQERRRSDSL DPEWQLIDNA YSANNSNLIN LDTTNPTAAP 480
  481 QEPVRDFGQL GELLRQHMNE EARVEQASAN TQTAQVDTVS TSTSTTSVTT NSVGTSPAAP 540
  541 DDKRTVPVYH TDESINKSIH AMMAMGFSNE GAWLTQLLES VQGNISAALD VMNVSQNRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle