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Protein Overview: CG10641-PA, FBpp...

General Information:
Name(s) found: FBpp0309283 [FlyBase]
CG10641-PA / FBpp0080727 [FlyBase]
Description(s) found:
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  • gi|7298512|gb|AAF53731.1| CG10641 [Drosophila melanogaster] [NCBI NR]
  • gi|27531009|dbj|BAC54122.1| EF-hand calcium binding hypothetical protein [Drosophila melanogaster] [NCBI NR]
  • gi|20151913|gb|AAM11316.1| SD04693p [Drosophila melanogaster] [NCBI NR]
  • gi|20140345|sp|Q9VJ26.1|EFHD_DROME RecName: Full=EF-hand domain-containing protein CG10641; AltName: Full=Swiprosin homolog [NCBI NR]
  • gi|20129605|ref|NP_609925.1| CG10641 [Drosophila melanogaster] [NCBI NR]
  • EF-hand domain-containing protein CG10641 OS=Drosophila melanogaster GN=CG10641 PE=2 SV=1 [Swiss-Prot]
  • EF-hand domain-containing protein D2 homolog OS=Drosophila melanogaster GN=Swip-1 PE=2 SV=1 [Swiss-Prot]
  • (Q9VJ26) EF-hand domain-containing protein CG10641 (Swiprosin homolog) [Swiss-Prot]
  • type=protein; loc=2L:complement(18978355..18978769,18986672..18986910); ID=FBpp0309283; name=Swip-1-PB; parent=FBgn0032731,FBtr0340322; dbxref=FlyBase:FBpp0309283,FlyBase_Annotation_IDs:CG10641-PB; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10641 (CG10641, FBgn0032731). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:18977748..18987276. It has the cytological map location 37B8. Based on sequence similarity, it is predicted to have molecular function</span>: calcium ion binding. There is experimental evidence that it is involved in the biological process</span>: mesoderm development. 10 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG10641-PA translation from_gene[CG10641 CG10641 FBgn0032731] seq_release:3 mol_weight=25087 cds_boundaries:(2L:18,956,441..18,964,993[-]) aa_length:217 transcript_info:[CG10641-RA seq_release:3] gene_info:[gene symbol:CG10641 FBgn0032731 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003661) CG10641 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG10641-PA [Drosophila melanogaster]gi|20151913|gb|AAM11316.1| SD04693p [Drosophila melanogaster]gi|27531009|dbj|BAC54122.1| EF-hand calcium binding hypothetical protein [Drosophila melanogaster]gi|20129605|ref|NP_609925.1| CG10641-PA [Drosophila melan [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(18978355..18978769,18986672..18986910); ID=FBpp0080727; name=CG10641-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF5373 [fly-100309-contam.fasta]
  • EF-hand calcium binding hypothetical protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG10641-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • SD04693p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • EF-hand domain-containing protein CG10641 (Swiprosin homolog) [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(18978355..18978769,18986672..18986910); ID=FBpp0080727; name=CG10641-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(18978355..18978769,18986672..18986910); ID=FBpp0080727; name=CG10641-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2L:complement(18978355..18978769,18986672..18986910); ID=FBpp0080727; name=CG10641-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731,FlyMine:FBpp0080727,modMine:FBpp0080727; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0080727; name=Swip-1-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731,FlyMine:FBpp0080727,modMine:FBpp0080727; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0309283; name=Swip-1-PB; parent=FBgn0032731,FBtr0340322; dbxref=FlyBase:FBpp0309283,FlyBase_Annotation_IDs:CG10641-PB,GB_protein:AHN54593,REFSEQ:NP_001286079; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0080727; name=Swip-1-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731,FlyMine:FBpp0080727,modMine:FBpp0080727; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0309283; name=Swip-1-PB; parent=FBgn0032731,FBtr0340322; dbxref=FlyBase:FBpp0309283,FlyBase_Annotation_IDs:CG10641-PB,GB_protein:AHN54593,REFSEQ:NP_001286079; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9VJ26, Swiprosin-1, isoform B OS=Drosophila melanogaster GN=Swip-1 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0080727 type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0080727; name=Swip-1-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731,FlyMine:FBpp0080727,modMine:FBpp0080727; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0309283 type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0309283; name=Swip-1-PB; parent=FBgn0032731,FBtr0340322; dbxref=FlyBase:FBpp0309283,FlyBase_Annotation_IDs:CG10641-PB,GB_protein:AHN54593,REFSEQ:NP_001286079; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0080727; name=Swip-1-PA; parent=FBgn0032731,FBtr0081185; dbxref=FlyBase:FBpp0080727,FlyBase_Annotation_IDs:CG10641-PA,GB_protein:AAF53731.1,REFSEQ:NP_609925,GB_protein:AAF53731,UniProt/Swiss-Prot:Q9VJ26,FlyMine:FBpp0080727,modMine:FBpp0080727; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:complement(join(18986672..18986910,18978355..18978769)); ID=FBpp0309283; name=Swip-1-PB; parent=FBgn0032731,FBtr0340322; dbxref=FlyBase:FBpp0309283,FlyBase_Annotation_IDs:CG10641-PB,GB_protein:AHN54593,REFSEQ:NP_001286079,UniProt/Swiss-Prot:Q9VJ26; MD5=aa96792e1477ff83c91e7dcc3268d4e2; length=217; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mesoderm development [IEP]
    Molecular Function: calcium ion binding [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSSNASSA SNKDSVDSPS STTNTDSSEL THILNRRQEI MESQEAGIEV RRTYKVVNVY  60
   61 TDFPEFSRNQ IKDYQKTFNT YDTARDGFLD LQELKFMMEK LGAPQTHLGL KQMIAEVDED 120
  121 NDGKISFREF LLIFRKAQAG ELDSDSGLNQ LARLTEVDVE QVGVSGAKNF FEAKIEQQLR 180
  181 TNKFHDEIRA EQEERRREEE ERAQRRQQFQ QRAAIFQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..64] PSI-BLAST 6.154902 NMR SOLUTION STRUCTURE OF CALERYTHRIN, AN EF-HAND CALCIUM-BINDING PROTEIN
    2 View Details [65..217] PSI-BLAST 31.69897 Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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