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Protein Overview: CG17996-PA

General Information:
Name(s) found: CG17996-PA / FBpp0080491 [FlyBase]
Description(s) found:
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  • gi|7298329|gb|AAF53557.1| CG17996 [Drosophila melanogaster] [NCBI NR]
  • gi|24584679|ref|NP_609803.1| CG17996 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17996 (CG17996, FBgn0032595). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:16730455..16730960. It has the cytological map location 36A12. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG17996-PA translation from_gene[CG17996 CG17996 FBgn0032595] seq_release:3 mol_weight=13768 cds_boundaries:(2L:16,708,638..16,709,044[-]) aa_length:118 transcript_info:[CG17996-RA seq_release:3] gene_info:[gene symbol:CG17996 FBgn0032595 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VJJ1) CG17996 protein [DrosMelano7227.FASTAC.txt]
  • (AE003652) CG17996 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17996-PA [Drosophila melanogaster]gi|24584679|ref|NP_609803.1| CG17996-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(16730551..16730855,16730909..16730960); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF5355 [fly-100309-contam.fasta]
  • CG17996-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(16730551..16730855,16730909..16730960); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(16730551..16730855,16730909..16730960); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG17996 OS=Drosophila melanogaster GN=CG17996 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(16730551..16730855,16730909..16730960); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557,FlyMine:FBpp0080491,modMine:FBpp0080491; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(join(16730909..16730960,16730551..16730855)); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557,FlyMine:FBpp0080491,modMine:FBpp0080491; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(16730909..16730960,16730551..16730855)); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557,FlyMine:FBpp0080491,modMine:FBpp0080491; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Uncharacterized protein OS=Drosophila melanogaster GN=CG17996 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0080491 type=protein; loc=2L:complement(join(16730909..16730960,16730551..16730855)); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557,FlyMine:FBpp0080491,modMine:FBpp0080491; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(16730909..16730960,16730551..16730855)); ID=FBpp0080491; name=CG17996-PA; parent=FBgn0032595,FBtr0080937; dbxref=FlyBase:FBpp0080491,FlyBase_Annotation_IDs:CG17996-PA,GB_protein:AAF53557.1,REFSEQ:NP_609803,GB_protein:AAF53557,UniProt/TrEMBL:Q9VJJ1,FlyMine:FBpp0080491,modMine:FBpp0080491; MD5=f9db40f2ff249caeb04363d9d54aee65; length=118; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 118 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLEQQPAVD PHNPHGLGDP NDTRLRKVER EVLIPKIMRD RAKTEFCSKE VADFQECCKA  60
   61 SSILMVATCR KQNSALKECL TQWYQNEAFK EECKQIYLQE RADYRSTGIP KKHRLEKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle