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Protein Overview: FBpp0310278, bgm-PA

General Information:
Name(s) found: FBpp0310278 [FlyBase]
bgm-PA / FBpp0080167 [FlyBase]
Description(s) found:
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  • gi|74947350|sp|Q9V3S9.1|BGM_DROME RecName: Full=Very long-chain-fatty-acid--CoA ligase bubblegum [NCBI NR]
  • gi|7298130|gb|AAF53368.1| bubblegum [Drosophila melanogaster] [NCBI NR]
  • gb|AAF44848.1| symbol=bgm; synonym=BG:DS01514.2; cDNA=method:''sim4'', score:''1000.0'', desc:''LD10778 Drosophila melanogaster embryo, full length mRNA sequence from BDGP''; match=method:''BLASTX'', version:''2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ul [NCBI NR]
  • gi|201065759|gb|ACH92289.1| FI05443p [Drosophila melanogaster] [NCBI NR]
  • gi|17933690|ref|NP_524698.1| bubblegum [Drosophila melanogaster] [NCBI NR]
  • Very long-chain-fatty-acid--CoA ligase bubblegum OS=Drosophila melanogaster GN=bgm PE=2 SV=1 [Swiss-Prot]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0310278; name=bgm-PB; parent=FBgn0027348,FBtr0343690; dbxref=FlyBase:FBpp0310278,FlyBase_Annotation_IDs:CG4501-PB; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r5.56; species=Dmel; [FlyBase]
  • The gene bubblegum is referred to in FlyBase by the symbol Dmel\bgm (CG4501, FBgn0027348). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:14013748..14019328. It has the cytological map location 34F1. There is experimental evidence that it has the molecular function</span>: long-chain-fatty-acid-CoA ligase activity. There is experimental evidence that it is involved in the biological process</span>: long-chain fatty acid metabolic process. 12 alleles are reported. The phenotypes of these alleles are annotated with: optic lobe; lamina. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4501-PA translation from_gene[CG4501 bgm FBgn0027348] seq_release:3 mol_weight=73611 cds_boundaries:(2L:13,997,948..14,001,158[+]) aa_length:666 transcript_info:[CG4501-RA seq_release:3] gene_info:[gene symbol:bgm FBgn0027348 gene_boundaries:(2L:13, [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V3S9) BG:DS01514.2 protein [DrosMelano7227.FASTAC.txt]
  • (AE003642) bgm gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4501-PA [Drosophila melanogaster]gi|7287810|gb|AAF44848.1| symbol=bgm; synonym=BG:DS01514.2; cDNA=method:''sim4'', score:''1000.0'', desc:''LD10778 Drosophila melanogaster embryo, full length mRNA sequence from BDGP''; match=method:''BLASTX'', version: [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein: [fly-100309-contam.fasta]
  • CG4501-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • bubblegum CG4501-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • FI05443p OS=Drosophila melanogaster GN=bgm-RA PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368,FlyMine:FBpp0080167,modMine:FBpp0080167; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368,FlyMine:FBpp0080167,modMine:FBpp0080167; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0312204; name=bgm-PC; parent=FBgn0027348,FBtr0346624; dbxref=FlyBase:FBpp0312204,FlyBase_Annotation_IDs:CG4501-PC,GB_protein:AHN54437,REFSEQ:NP_001285923; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368,FlyMine:FBpp0080167,modMine:FBpp0080167; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0312204; name=bgm-PC; parent=FBgn0027348,FBtr0346624; dbxref=FlyBase:FBpp0312204,FlyBase_Annotation_IDs:CG4501-PC,GB_protein:AHN54437,REFSEQ:NP_001285923; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9V3S9, Bubblegum, isoform C OS=Drosophila melanogaster GN=bgm PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0080167 type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368,FlyMine:FBpp0080167,modMine:FBpp0080167; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0312204 type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0312204; name=bgm-PC; parent=FBgn0027348,FBtr0346624; dbxref=FlyBase:FBpp0312204,FlyBase_Annotation_IDs:CG4501-PC,GB_protein:AHN54437,REFSEQ:NP_001285923; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0080167; name=bgm-PA; parent=FBgn0027348,FBtr0080590; dbxref=FlyBase:FBpp0080167,FlyBase_Annotation_IDs:CG4501-PA,GB_protein:AAF53368.1,REFSEQ:NP_524698,GB_protein:AAF53368,UniProt/Swiss-Prot:Q9V3S9,FlyMine:FBpp0080167,modMine:FBpp0080167; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(14015796..14016034,14016132..14016477,14016538..14017037,14018035..14018626,14018686..14019009); ID=FBpp0312204; name=bgm-PC; parent=FBgn0027348,FBtr0346624; dbxref=FlyBase:FBpp0312204,FlyBase_Annotation_IDs:CG4501-PC,GB_protein:AHN54437,REFSEQ:NP_001285923,UniProt/Swiss-Prot:Q9V3S9; MD5=53288c02f62c27943b2c6cc64e463b3f; length=666; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 666 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: long-chain fatty acid metabolic process [IMP]
    Molecular Function: long-chain fatty acid-CoA ligase activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTIDALYNR PGPNRLRQAD AYRTTNRQDA VKIRMAKDGI GAEEPISVPG LLKRTVNNYG  60
   61 DYPALRTKNG KNGYHTVTYK QYEQKVHQVA KAFIKLGLEE HHSVGVLAFN CAEWFYSAMG 120
  121 AIHARGIIAG IYTTNSADAV QHVLESSHAQ IVVVDDAKQM DKIHAIRDKL PKLKAAIQIQ 180
  181 EPYSPYLKKE DGYYRWSEIE SMNVSDVEDQ YMTRLENVAI NECCCLVYTS GTVGMPKGVM 240
  241 LSHDNITFDV RGIVKAMDRV VVGAESIVSY LPLSHVAAQT VDIYTCAFVA GCIWFADKDA 300
  301 LKGTLVKSLQ DARPTRFMGV PRVYEKFQER MVAVASSSGS LKKMLASWAK GITLKHYMVS 360
  361 QGKSSGGFRY KIAKSLIMSK VKQALGFDRV LTLASAAAPM SPETKKYFLS LDLKIVDAFG 420
  421 MSETAGCHTI CLPDSVGLNT IGKTLPGCES KFINKDANGH GELCIRGRHV FMGYIDNKEK 480
  481 TEESLDDDCW LHSGDLGFVD DKGYVSLTGR SKEIIITAGG ENIPPVHIEN TIKKELDAIS 540
  541 NAFLVGEQRK YLTVLITLKT EVDKDSGEPL DELSHESSVW VKSLGVEHKT VSDILAAGPC 600
  601 PKVWKSIEDA IKRANKQSIS NAQKVQKFTI LPHDFSIPTG ELGPTLKVKR NVVSKMYADE 660
  661 IEKLYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle