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Protein Overview: CG6565-PA, FBpp0...

General Information:
Name(s) found: FBpp0312088 [FlyBase]
FBpp0309560 [FlyBase]
CG6565-PA / FBpp0080047 [FlyBase]
Description(s) found:
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  • gi|7298051|gb|AAF53292.1| CG6565 [Drosophila melanogaster] [NCBI NR]
  • gi|19921246|ref|NP_609644.1| CG6565 [Drosophila melanogaster] [NCBI NR]
  • gi|17862014|gb|AAL39484.1| LD05321p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0312088; name=CG6565-PC; parent=FBgn0032513,FBtr0346420; dbxref=FlyBase:FBpp0312088,FlyBase_Annotation_IDs:CG6565-PC; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0309560; name=CG6565-PB; parent=FBgn0032513,FBtr0342631; dbxref=FlyBase:FBpp0309560,FlyBase_Annotation_IDs:CG6565-PB; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6565 (CG6565, FBgn0032513). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:13374179..13376182. It has the cytological map location 34B8. Based on sequence similarity, it is predicted to have molecular function</span>: phosphatidylcholine transmembrane transporter activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6565-PA translation from_gene[CG6565 CG6565 FBgn0032513] seq_release:3 mol_weight=50048 cds_boundaries:(2L:13,363,374..13,364,707[+]) aa_length:425 transcript_info:[CG6565-RA seq_release:3] gene_info:[gene symbol:CG6565 FBgn0032513 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VJZ2) CG6565 protein (LD05321p) [DrosMelano7227.FASTAC.txt]
  • (AE003639) CG6565 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6565-PA [Drosophila melanogaster]gi|17862014|gb|AAL39484.1| LD05321p [Drosophila melanogaster]gi|19921246|ref|NP_609644.1| CG6565-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292; MD5=3 [fly-100309-contam.fasta]
  • CG6565-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD05321p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG6565 OS=Drosophila melanogaster GN=CG6565 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292,FlyMine:FBpp0080047,modMine:FBpp0080047; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292,FlyMine:FBpp0080047,modMine:FBpp0080047; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0309560; name=CG6565-PB; parent=FBgn0032513,FBtr0342631; dbxref=GB_protein:AHN54405,REFSEQ:NP_001285891,FlyBase:FBpp0309560,FlyBase_Annotation_IDs:CG6565-PB; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0312088; name=CG6565-PC; parent=FBgn0032513,FBtr0346420; dbxref=FlyBase:FBpp0312088,FlyBase_Annotation_IDs:CG6565-PC,GB_protein:AHN54406,REFSEQ:NP_001285892; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0309560; name=CG6565-PB; parent=FBgn0032513,FBtr0342631; dbxref=GB_protein:AHN54405,REFSEQ:NP_001285891,FlyBase:FBpp0309560,FlyBase_Annotation_IDs:CG6565-PB; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292,FlyMine:FBpp0080047,modMine:FBpp0080047; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0312088; name=CG6565-PC; parent=FBgn0032513,FBtr0346420; dbxref=FlyBase:FBpp0312088,FlyBase_Annotation_IDs:CG6565-PC,GB_protein:AHN54406,REFSEQ:NP_001285892; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG6565, isoform A OS=Drosophila melanogaster GN=CG6565 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0080047 type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292,FlyMine:FBpp0080047,modMine:FBpp0080047; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0309560 type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0309560; name=CG6565-PB; parent=FBgn0032513,FBtr0342631; dbxref=GB_protein:AHN54405,REFSEQ:NP_001285891,FlyBase:FBpp0309560,FlyBase_Annotation_IDs:CG6565-PB; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0312088 type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0312088; name=CG6565-PC; parent=FBgn0032513,FBtr0346420; dbxref=FlyBase:FBpp0312088,FlyBase_Annotation_IDs:CG6565-PC,GB_protein:AHN54406,REFSEQ:NP_001285892; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0080047; name=CG6565-PA; parent=FBgn0032513,FBtr0080468; dbxref=FlyBase:FBpp0080047,FlyBase_Annotation_IDs:CG6565-PA,GB_protein:AAF53292.1,REFSEQ:NP_609644,GB_protein:AAF53292,UniProt/TrEMBL:Q9VJZ2,FlyMine:FBpp0080047,modMine:FBpp0080047; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0309560; name=CG6565-PB; parent=FBgn0032513,FBtr0342631; dbxref=GB_protein:AHN54405,REFSEQ:NP_001285891,FlyBase:FBpp0309560,FlyBase_Annotation_IDs:CG6565-PB,UniProt/TrEMBL:Q9VJZ2; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(13374504..13375151,13375211..13375840); ID=FBpp0312088; name=CG6565-PC; parent=FBgn0032513,FBtr0346420; dbxref=FlyBase:FBpp0312088,FlyBase_Annotation_IDs:CG6565-PC,GB_protein:AHN54406,REFSEQ:NP_001285892,UniProt/TrEMBL:Q9VJZ2; MD5=362726fe9e85b719cde26b0f843869e6; length=425; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: phosphatidylcholine transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFNRFVLAI KNQSRETLRA WSYQCESIFA QRSRRVQQLF SFYQSVYGTQ GLKQLWRAYY  60
   61 RRELQPPLRG MVMSAVGLVG LNIKRMGSDG FDWNKERLAL SNFDLCRRDI EFINALPNNQ 120
  121 LCDRCQAKKM KYCYCQLGNQ RCKKGQSQPS TSKEAETDPD TSISNCLRPL DLDVRNAPAG 180
  181 TVRIQAQDDQ KWEPYFSKNE FSIWRRQERS SLYSYKVYAR FDDITADDFL HVQTDLDYRR 240
  241 QWDDTALRLE LISEDPVPGS NSHLIYWEMQ WPRLFANRDY VYCRRYIKDD NKKLIFICNR 300
  301 GATHNTYPAL SGKVRVTDYW SLMVIKPFRG FHEPGLHFVL TYFDDPGIPI PQNIKSWVTQ 360
  361 KQMPEFLTKM YVATKNYACS RAIKMKDMFH GFALINDEYT ANEQRGSWLG SLSRRKVNSK 420
  421 PEAGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle