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Protein Overview: CG13144-PA

General Information:
Name(s) found: CG13144-PA / FBpp0079627 [FlyBase]
Description(s) found:
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  • gi|92109938|gb|ABE73293.1| IP09348p [Drosophila melanogaster] [NCBI NR]
  • gi|7297713|gb|AAF52965.1| CG13144 [Drosophila melanogaster] [NCBI NR]
  • gi|24583456|ref|NP_609415.1| CG13144 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13144 (CG13144, FBgn0032260). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10489900..10491429. It has the cytological map location 31F1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: structural molecule activity. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13144-PA translation from_gene[CG13144 CG13144 FBgn0032260] seq_release:3 mol_weight=33123 cds_boundaries:(2L:10,482,901..10,483,773[-]) aa_length:291 transcript_info:[CG13144-RA seq_release:3] gene_info:[gene symbol:CG13144 FBgn0032260 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VKU4) CG13144 protein [DrosMelano7227.FASTAC.txt]
  • (AE003628) CG13144 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13144-PA [Drosophila melanogaster]gi|24583456|ref|NP_609415.1| CG13144-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965; MD5=cc541c8c4849 [fly-100309-contam.fasta]
  • CG13144-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP09348p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13144 OS=Drosophila melanogaster GN=CG13144 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965,FlyMine:FBpp0079627,modMine:FBpp0079627; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG13144 OS=Drosophila melanogaster GN=CG13144 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965,FlyMine:FBpp0079627,modMine:FBpp0079627; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965,FlyMine:FBpp0079627,modMine:FBpp0079627; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • IP09348p OS=Drosophila melanogaster GN=CG13144 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0079627 type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965,FlyMine:FBpp0079627,modMine:FBpp0079627; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(10490489..10491364); ID=FBpp0079627; name=CG13144-PA; parent=FBgn0032260,FBtr0080037; dbxref=FlyBase:FBpp0079627,FlyBase_Annotation_IDs:CG13144-PA,GB_protein:AAF52965.1,REFSEQ:NP_609415,GB_protein:AAF52965,UniProt/TrEMBL:Q9VKU4,FlyMine:FBpp0079627,modMine:FBpp0079627; MD5=cc541c8c484996cb052bac260c6ed43e; length=291; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: viral capsid [IEA]
    Biological Process: NONE FOUND
    Molecular Function: structural molecule activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKAIKKELS FSLDTLERYR AKYGRSASLD TNGTPIAHTD GDQAAPAPPP PSIFTKSLSP  60
   61 PKMTKLQELQ QKKEAYLRAK EHEREMEQLQ RTERRSIING SDTPKPKTGS PTSTSPTPNA 120
  121 SSSSTAAVAT KTSSPAGYTN WSNHHATLCS QSWVAISELM YFCDKYEFTT LSTRDLRTHQ 180
  181 EIVAEVRALL SGKAPFDQRT RFPGNIHDPE NLWVCIGRCA SVEYHLQRII SIFRKPLNQL 240
  241 TPDKQRTVRQ NFHLAVSELR LDISARISEV RLYDRLVFER EFRLEWLDEE A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..206] deduced N/A No confident structure predictions are available.
    3 View Details [207..291] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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