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Protein Overview: Trp1-PA

General Information:
Name(s) found: Trp1-PA / FBpp0079521 [FlyBase]
Description(s) found:
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  • gi|7297594|gb|AAF52847.1| translocation protein 1, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|28317008|gb|AAO39524.1| RE23984p [Drosophila melanogaster] [NCBI NR]
  • gi|17136944|ref|NP_477008.1| translocation protein 1, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene Translocation protein 1 is referred to in FlyBase by the symbol Dmel\Trp1 (CG4758, FBgn0011584). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10009386..10013171. It has the cytological map location 30F5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: SRP-dependent cotranslational protein targeting to membrane. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG4758-PA translation from_gene[CG4758 Trp1 FBgn0011584] seq_release:3 mol_weight=47078 cds_boundaries:(2L:10,001,910..10,004,899[+]) aa_length:415 transcript_info:[CG4758-RA seq_release:3] gene_info:[gene symbol:Trp1 FBgn0011584 gene_boundaries:(2L:1 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VL50) TRP1 protein (RE23984p) [DrosMelano7227.FASTAC.txt]
  • (AE003627) Trp1 gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4758-PA, isoform A [Drosophila melanogaster]gi|28317008|gb|AAO39524.1| RE23984p [Drosophila melanogaster]gi|17136944|ref|NP_477008.1| CG4758-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ: [fly-100309-contam.fasta]
  • Translocation protein 1 CG4758-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE23984p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4758-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • RE23984p OS=Drosophila melanogaster GN=Trp1 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847,FlyMine:FBpp0079521,modMine:FBpp0079521; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847,FlyMine:FBpp0079521,modMine:FBpp0079521; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847,FlyMine:FBpp0079521,modMine:FBpp0079521; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9VL49, RE23984p OS=Drosophila melanogaster GN=Trp1 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0079521 type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847,FlyMine:FBpp0079521,modMine:FBpp0079521; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(10009501..10009536,10010737..10011552,10011607..10011908,10012400..10012493); ID=FBpp0079521; name=Trp1-PA; parent=FBgn0011584,FBtr0079931; dbxref=FlyBase:FBpp0079521,FlyBase_Annotation_IDs:CG4758-PA,GB_protein:AAF52847.1,REFSEQ:NP_477008,GB_protein:AAF52847,UniProt/TrEMBL:Q9VL50,FlyMine:FBpp0079521,modMine:FBpp0079521; MD5=0c7fc7f548e4009a74289da6a6590543; length=415; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 415 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Sec61 translocon complex [ISS][NAS]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [ISS]
    Molecular Function: protein transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKKRARRR KDEYTEPGAQ KVDKPSKDEK NVAKWLKKNV KTKKTKFLSH IVEYFTSSKA  60
   61 IDALLKSKFT EGSNPLFTTR EQVIEFLDVM LEHKFFHRAK KVPVTLEEIR GKSGGDKKAD 120
  121 KEKTQDKEKD KAKDEKKDTD PEGDNGQGDG GASGNEKEKE KKEKKKRKIR LDMHPEQIFV 180
  181 DGSEAYVWIY DPIPLHYWIF GFILLLGAVG ICLFPLWPPL LRKGVYYLSI AAAGFLVFIL 240
  241 ALTIVRLIVF IIVWALTGGK LHFWIFPNLT EDVSFFASFW PLYESNYNSD PNNSSAKTDK 300
  301 KSKSKDKKKE KESDAEDTAV DADGDADGDV DAEVSTLEPE KIELIKEHDT DMEIRKRRKV 360
  361 GADDYEEDDV DEEETKAQPK DSKAGTPRNS GSDSESSSKD YEIISSSEVQ NVAGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle