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Protein Overview: Peritrophin-15b-...

General Information:
Name(s) found: FBpp0304316 [FlyBase]
Peritrophin-15b-PA / FBpp0079319 [FlyBase]
Description(s) found:
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  • gi|7297408|gb|AAF52667.1| Peritrophin-15b [Drosophila melanogaster] [NCBI NR]
  • gi|45825059|gb|AAS77437.1| LP19665p [Drosophila melanogaster] [NCBI NR]
  • gi|17986207|ref|NP_524982.1| Peritrophin-15b [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:complement(8394533..8394804,8394872..8394881); ID=FBpp0304316; name=Peritrophin-15b-PC; parent=FBgn0040958,FBtr0331994; dbxref=FlyBase:FBpp0304316,FlyBase_Annotation_IDs:CG31893-PC,REFSEQ:NP_001260249,GB_protein:AGB92785; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r5.56; species=Dmel; [FlyBase]
  • The gene Peritrophin-15b is referred to in FlyBase by the symbol Dmel\Peritrophin-15b (CG31893, FBgn0040958). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:8394510..8394897. It has the cytological map location 29C1. Based on sequence similarity, it is predicted to have molecular function</span>: chitin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: chitin metabolic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG31893-PA translation from_gene[CG31893 Peritrophin-15b FBgn0040958] seq_release:3 mol_weight=10256 cds_boundaries:(2L:8,386,767..8,387,112[-]) aa_length:93 transcript_info:[CG31893-RA seq_release:3] gene_info:[gene symbol:Peritrophin-15b synonyms:[C [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VLL9) CG13395 protein [DrosMelano7227.FASTAC.txt]
  • (AE003621) CG13395 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG31893-PA [Drosophila melanogaster]gi|17986207|ref|NP_524982.1| CG31893-PA [Drosophila melanogaster]gi|45825059|gb|AAS77437.1| LP19665p [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(8394533..8394804,8394872..8394881); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF [fly-100309-contam.fasta]
  • CG31893-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LP19665p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Peritrophin-15b CG31893-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(8394533..8394804,8394872..8394881); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(8394533..8394804,8394872..8394881); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • LP19665p OS=Drosophila melanogaster GN=Peritrophin-15b PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(8394533..8394804,8394872..8394881); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667,FlyMine:FBpp0079319,modMine:FBpp0079319; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(8394533..8394804,8394872..8394881); ID=FBpp0304316; name=Peritrophin-15b-PC; parent=FBgn0040958,FBtr0331994; dbxref=FlyBase:FBpp0304316,FlyBase_Annotation_IDs:CG31893-PC; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • LP19665p OS=Drosophila melanogaster GN=Peritrophin-15b PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667,FlyMine:FBpp0079319,modMine:FBpp0079319; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0304316; name=Peritrophin-15b-PC; parent=FBgn0040958,FBtr0331994; dbxref=FlyBase:FBpp0304316,FlyBase_Annotation_IDs:CG31893-PC,REFSEQ:NP_001260249,GB_protein:AGB92785; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667,FlyMine:FBpp0079319,modMine:FBpp0079319; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0304316; name=Peritrophin-15b-PC; parent=FBgn0040958,FBtr0331994; dbxref=FlyBase:FBpp0304316,FlyBase_Annotation_IDs:CG31893-PC,REFSEQ:NP_001260249,GB_protein:AGB92785; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0079319 type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667,FlyMine:FBpp0079319,modMine:FBpp0079319; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0304316 type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0304316; name=Peritrophin-15b-PC; parent=FBgn0040958,FBtr0331994; dbxref=FlyBase:FBpp0304316,FlyBase_Annotation_IDs:CG31893-PC,REFSEQ:NP_001260249,GB_protein:AGB92785; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0079319; name=Peritrophin-15b-PA; parent=FBgn0040958,FBtr0079714; dbxref=FlyBase:FBpp0079319,FlyBase_Annotation_IDs:CG31893-PA,GB_protein:AAF52667.1,REFSEQ:NP_524982,GB_protein:AAF52667,UniProt/TrEMBL:Q9VLL9,FlyMine:FBpp0079319,modMine:FBpp0079319; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:complement(join(8394872..8394881,8394533..8394804)); ID=FBpp0304316; name=Peritrophin-15b-PC; parent=FBgn0040958,FBtr0331994; dbxref=FlyBase:FBpp0304316,FlyBase_Annotation_IDs:CG31893-PC,REFSEQ:NP_001260249,GB_protein:AGB92785,UniProt/TrEMBL:Q9VLL9; MD5=39d228780fcc21725b3539b5726a797a; length=93; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 93 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [ISS]
    extracellular region [IEA]
    Biological Process: chitin metabolic process [IEA]
    Molecular Function: chitin binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAALVLLFL TLCVAIYADL DCNPDGNGEP DCVGRSGEIS RDFWDPTHYW QCSSTGQAEL  60
   61 VACEQNTGFD PKTGSCVDWS VWQWYPPCSE AST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] FFAS03 1.76 Tachycitin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • polysaccharide binding
    		•  0.344277505012866 bayes_pls_golite062009
  • pattern binding
    		•  0.322636448989813 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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