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Protein Overview: FBpp0302926, hom...

General Information:
Name(s) found: FBpp0302926 [FlyBase]
homer-PA / FBpp0078936 [FlyBase]
Description(s) found:
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  • gi|7297161|gb|AAF52428.1| homer, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|3834623|gb|AAC71030.1| homer [Drosophila melanogaster] [NCBI NR]
  • gi|28626488|gb|AAO49163.1| LD03829p [Drosophila melanogaster] [NCBI NR]
  • gi|17137610|ref|NP_477396.1| homer, isoform A [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:complement(6721024..6721131,6721188..6721454,6721518..6721596,6721650..6722086,6722142..6722430,6723193..6723197); ID=FBpp0302926; name=homer-PD; parent=FBgn0025777,FBtr0329892; dbxref=FlyBase:FBpp0302926,FlyBase_Annotation_IDs:CG11324-PD,REFSEQ:NP_001260150,GB_protein:AGB92686; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r5.56; species=Dmel; [FlyBase]
  • The gene homer is referred to in FlyBase by the symbol Dmel\homer (CG11324, FBgn0025777). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:6720395..6723355. It has the cytological map location 27A1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: adult behavior; regulation of locomotion. 19 alleles are reported. The phenotype of these alleles is annotated with: tarsal segment. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG11324-PA translation from_gene[CG11324 homer FBgn0025777] seq_release:3 mol_weight=42705 cds_boundaries:(2L:6,713,243..6,715,413[-]) aa_length:394 transcript_info:[CG11324-RA seq_release:3] gene_info:[gene symbol:homer FBgn0025777 gene_boundaries:(2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (O96607) HOMER protein (LD03829p) [DrosMelano7227.FASTAC.txt]
  • (AE003614) homer gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11324-PA, isoform A [Drosophila melanogaster]gi|28626488|gb|AAO49163.1| LD03829p [Drosophila melanogaster]gi|17137610|ref|NP_477396.1| CG11324-PA [Drosophila melanogaster]gi|3834623|gb|AAC71030.1| homer [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(6721024..6721131,6721188..6721454,6721518..6721596,6721650..6722086,6722142..6722430,6723193..6723197); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG1132 [fly-100309-contam.fasta]
  • homer [Drosophila melanogaster] [nr-271106-contam.fasta]
  • homer CG11324-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD03829p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11324-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(6721024..6721131,6721188..6721454,6721518..6721596,6721650..6722086,6722142..6722430,6723193..6723197); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(6721024..6721131,6721188..6721454,6721518..6721596,6721650..6722086,6722142..6722430,6723193..6723197); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Homer OS=Drosophila melanogaster GN=homer PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(6721024..6721131,6721188..6721454,6721518..6721596,6721650..6722086,6722142..6722430,6723193..6723197); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428,FlyMine:FBpp0078936,modMine:FBpp0078936; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(6721024..6721131,6721188..6721454,6721518..6721596,6721650..6722086,6722142..6722430,6723193..6723197); ID=FBpp0302926; name=homer-PD; parent=FBgn0025777,FBtr0329892; dbxref=FlyBase:FBpp0302926,FlyBase_Annotation_IDs:CG11324-PD; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Homer OS=Drosophila melanogaster GN=homer PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428,FlyMine:FBpp0078936,modMine:FBpp0078936; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0302926; name=homer-PD; parent=FBgn0025777,FBtr0329892; dbxref=FlyBase:FBpp0302926,FlyBase_Annotation_IDs:CG11324-PD,REFSEQ:NP_001260150,GB_protein:AGB92686; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428,FlyMine:FBpp0078936,modMine:FBpp0078936; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0302926; name=homer-PD; parent=FBgn0025777,FBtr0329892; dbxref=FlyBase:FBpp0302926,FlyBase_Annotation_IDs:CG11324-PD,REFSEQ:NP_001260150,GB_protein:AGB92686; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q0E8S7, Homer OS=Drosophila melanogaster GN=homer PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0078936 type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428,FlyMine:FBpp0078936,modMine:FBpp0078936; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0302926 type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0302926; name=homer-PD; parent=FBgn0025777,FBtr0329892; dbxref=FlyBase:FBpp0302926,FlyBase_Annotation_IDs:CG11324-PD,REFSEQ:NP_001260150,GB_protein:AGB92686; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0078936; name=homer-PA; parent=FBgn0025777,FBtr0079306; dbxref=FlyBase:FBpp0078936,FlyBase_Annotation_IDs:CG11324-PA,GB_protein:AAF52428.1,REFSEQ:NP_477396,GB_protein:AAF52428,UniProt/TrEMBL:O96607,FlyMine:FBpp0078936,modMine:FBpp0078936; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:complement(join(6723193..6723197,6722142..6722430,6721650..6722086,6721518..6721596,6721188..6721454,6721024..6721131)); ID=FBpp0302926; name=homer-PD; parent=FBgn0025777,FBtr0329892; dbxref=FlyBase:FBpp0302926,FlyBase_Annotation_IDs:CG11324-PD,REFSEQ:NP_001260150,GB_protein:AGB92686,UniProt/TrEMBL:O96607; MD5=025b8b2dce24455d9b33540e29e5bb67; length=394; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: dendrite [IDA]
    Biological Process: regulation of locomotion [IMP]
    adult behavior [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEQPIFTCQ AHVFHIDPKT KRTWITASMK AVNVSFFYDS SRNLYRIISV EGTKAVINST  60
   61 ITPNMTFTQT SQKFGQWSDV RANTVYGLGF ASEAELTKFV EKFQEVKEAT KNAMKSANGS 120
  121 NAVTPTTSAN TSPISGRAVG SMQNDNTAID PHTVEPPNMS NTNTQNANPD SPSHKLLNTS 180
  181 DVKADIGSAT PSPQPTSGVT GGGGVTISSG GSIVGMHTGP GAGATAEQQL KYENERLKMA 240
  241 LAQSCANAKK WEIELATLKN NNIRLTSALQ ESTANVDEWK RQLHTYKEEN IRLKRDMEQL 300
  301 CVGGGVVAAA GGGATEDELR REVATLKART EQLQKELMQQ ELELKSANIS LREKSNDQTL 360
  361 AKLSEVNGVF AKHLSELYGV QKDMESLIQI AKCT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle