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Protein Overview: CG13993-PA, FBpp...

General Information:
Name(s) found: FBpp0309825 [FlyBase]
CG13993-PA / FBpp0078822 [FlyBase]
Description(s) found:
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  • gi|19920798|ref|NP_608992.1| CG13993 [Drosophila melanogaster] [NCBI NR]
  • gi|17945915|gb|AAL49003.1| RE41391p [Drosophila melanogaster] [NCBI NR]
  • gi|10728601|gb|AAF52339.2| CG13993 [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0309825; name=CG13993-PB; parent=FBgn0031776,FBtr0343125; dbxref=FlyBase:FBpp0309825,FlyBase_Annotation_IDs:CG13993-PB; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13993 (CG13993, FBgn0031776). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:6069079..6069838. It has the cytological map location 26B4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: unfolded protein binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein folding. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG13993-PA translation from_gene[CG13993 CG13993 FBgn0031776] seq_release:3 mol_weight=14749 cds_boundaries:(2L:6,061,436..6,061,978[+]) aa_length:126 transcript_info:[CG13993-RA seq_release:3] gene_info:[gene symbol:CG13993 FBgn0031776 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VMH8) CG13993 protein (RE41391p) [DrosMelano7227.FASTAC.txt]
  • (AE003612) CG13993 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13993-PA [Drosophila melanogaster]gi|17945915|gb|AAL49003.1| RE41391p [Drosophila melanogaster]gi|19920798|ref|NP_608992.1| CG13993-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein: [fly-100309-contam.fasta]
  • CG13993-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE41391p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13993 OS=Drosophila melanogaster GN=CG13993 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339,FlyMine:FBpp0078822,modMine:FBpp0078822; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG13993 OS=Drosophila melanogaster GN=CG13993 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339,FlyMine:FBpp0078822,modMine:FBpp0078822; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0309825; name=CG13993-PB; parent=FBgn0031776,FBtr0343125; dbxref=GB_protein:AHN54176,REFSEQ:NP_001285661,FlyBase:FBpp0309825,FlyBase_Annotation_IDs:CG13993-PB; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339,FlyMine:FBpp0078822,modMine:FBpp0078822; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0309825; name=CG13993-PB; parent=FBgn0031776,FBtr0343125; dbxref=GB_protein:AHN54176,REFSEQ:NP_001285661,FlyBase:FBpp0309825,FlyBase_Annotation_IDs:CG13993-PB; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • RE41391p OS=Drosophila melanogaster GN=CG13993 PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0078822 type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=CG13993-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339,FlyMine:FBpp0078822,modMine:FBpp0078822; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0309825 type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0309825; name=CG13993-PB; parent=FBgn0031776,FBtr0343125; dbxref=GB_protein:AHN54176,REFSEQ:NP_001285661,FlyBase:FBpp0309825,FlyBase_Annotation_IDs:CG13993-PB; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0078822; name=Pfdn1-PA; parent=FBgn0031776,FBtr0079191; dbxref=FlyBase:FBpp0078822,FlyBase_Annotation_IDs:CG13993-PA,GB_protein:AAF52339.2,REFSEQ:NP_608992,GB_protein:AAF52339,UniProt/TrEMBL:Q9VMH8,FlyMine:FBpp0078822,modMine:FBpp0078822; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:join(6069221..6069250,6069347..6069489,6069559..6069766); ID=FBpp0309825; name=Pfdn1-PB; parent=FBgn0031776,FBtr0343125; dbxref=GB_protein:AHN54176,REFSEQ:NP_001285661,FlyBase:FBpp0309825,FlyBase_Annotation_IDs:CG13993-PB,UniProt/TrEMBL:Q9VMH8; MD5=7c29cd6b4bb3e7f99bc86e9eec9dcaf1; length=126; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 126 amino acids

    Gene Ontology:
    Cellular Component: prefoldin complex [IEA]
    Biological Process: protein folding [IEA]
    Molecular Function: unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQMDIELKK AFTEMQINKL ETTKKIHMID MKCDMVKTGK QKYQLTEKGT SSLADDTRVY  60
   61 QSVGRMFLLT DVQNMREDLK ARQEKCDKAI ELLEKKKEFL QKSLKSQEDG LRELVQQRKE 120
  121 ADQTAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] FFAS03 2.22 Prefoldin beta subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle