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Protein Overview: Pino-PB

General Information:
Name(s) found: Pino-PB / FBpp0077652 [FlyBase]
Description(s) found:
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  • gi|7296123|gb|AAF51417.1| pinocchio, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24580782|ref|NP_722679.1| pinocchio, isoform B [Drosophila melanogaster] [NCBI NR]
  • The gene Pinocchio is referred to in FlyBase by the symbol Dmel\Pino (CG4710, FBgn0016926). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:1114652..1128953. It has the cytological map location 21F1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; response to chemical stimulus. 24 alleles are reported. The phenotype of these alleles is annotated with: antenna. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG4710-PB translation from_gene[CG4710 CG4710 FBgn0031303] seq_release:3 mol_weight=26306 cds_boundaries:(2L:1,117,403..1,130,011[-]) aa_length:249 transcript_info:[CG4710-RB seq_release:3] gene_info:[gene symbol:CG4710 FBgn0031303 gene_boundaries:(2L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VPW8) CG4710 protein [DrosMelano7227.FASTAC.txt]
  • (AE003587) CG4710 gene product [alt 1] [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4710-PB, isoform B [Drosophila melanogaster]gi|24580782|ref|NP_722679.1| CG4710-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(1115734..1115943,1116441..1116690,1117444..1117516,1128129..1128345); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP [fly-100309-contam.fasta]
  • CG4710-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • smell impaired 21F CG4710-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(1115734..1115943,1116441..1116690,1117444..1117516,1128129..1128345); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(1115734..1115943,1116441..1116690,1117444..1117516,1128129..1128345); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Pinocchio, isoform B OS=Drosophila melanogaster GN=Pino PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(1115734..1115943,1116441..1116690,1117444..1117516,1128129..1128345); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417,FlyMine:FBpp0077652,modMine:FBpp0077652; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • FI20014p1 OS=Drosophila melanogaster GN=Pino PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:complement(join(1128129..1128345,1117444..1117516,1116441..1116690,1115734..1115943)); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417,FlyMine:FBpp0077652,modMine:FBpp0077652; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(1128129..1128345,1117444..1117516,1116441..1116690,1115734..1115943)); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417,FlyMine:FBpp0077652,modMine:FBpp0077652; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FI20014p1 OS=Drosophila melanogaster GN=Pino PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0077652 type=protein; loc=2L:complement(join(1128129..1128345,1117444..1117516,1116441..1116690,1115734..1115943)); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417,FlyMine:FBpp0077652,modMine:FBpp0077652; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(1128129..1128345,1117444..1117516,1116441..1116690,1115734..1115943)); ID=FBpp0077652; name=Pino-PB; parent=FBgn0016926,FBtr0077987; dbxref=FlyBase:FBpp0077652,FlyBase_Annotation_IDs:CG4710-PB,GB_protein:AAF51417.1,REFSEQ:NP_722679,GB_protein:AAF51417,UniProt/Swiss-Prot:Q9VPW8,FlyMine:FBpp0077652,modMine:FBpp0077652; MD5=1f71b65bbbafd710bcb1a0bff414df21; length=249; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to chemical stimulus [IMP]
    olfactory behavior [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGSNNNHI SASSSSSNNN NNSSLVQQQQ QRSTTSVSVS SSHIVTEWED GIIFDVDDPD  60
   61 FCNLATDKLN FIVPSAANMS IASVHGPQIA DICSPLSHHN LGLSASLPDL VGSPLEISMD 120
  121 NVLTIEELRQ HMGSCFTCGV SWTDDHVSLD CSECGGYSLE RPCPLCDGQC GVQWKRDFAM 180
  181 SHACSQARWV GVCISYPEVV AGVQLPVGAG AGAATSCAAA AANQLRLAQE LCSRLEQLST 240
  241 STASKSGRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] MSA 2.007969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

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