YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: lectin-21Cb-PA

General Information:
Name(s) found: lectin-21Cb-PA / FBpp0077709 [FlyBase]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • The gene lectin-21Cb is referred to in FlyBase by the symbol Dmel\lectin-21Cb (CG13686, FBgn0040106). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:620433..621540. It has the cytological map location 21E2. Based on sequence similarity, it is predicted to have molecular function</span>: mannose binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: mannose binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHAPIPYDE RFIRRFPDYR LIDYPQGAQE NNCPKVSLSE RLEKRGEFSL VEFDPLLKFI  60
   61 VKNPHKELLG EIEGLVGHTE NKLQPMKSVI PNQSKALLNY LDLHSKLEYL DAALQKAINS 120
  121 LQCSLKNTKV MSTGKPHPEF QKLGSRYFYI ERHVRQNWFD AADKCRRMGG HLATPQDEDE 180
  181 LYLIRKQLEA RWFWLDISNL VDKDQYISLA TGKEVSYLKW RHGEPKKSST ANCAYLYAGD 240
  241 YYTYQCSDRN FFICQAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] MSA 1.157996 View MSA. No confident structure predictions are available.
    2 View Details [69..257] PSI-BLAST 27.522879 Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.13629480035749 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.44675717945952 bayes_pls_golite062009
  • protein binding
    		•  0.059857076934361 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle