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Protein Overview: FBpp0307923, CG3...

General Information:
Name(s) found: FBpp0307923 [FlyBase]
CG3645-PB / FBpp0077800 [FlyBase]
CG3645-PA / FBpp0077799 [FlyBase]
Description(s) found:
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  • gi|24580595|ref|NP_722619.1| CG3645, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22945601|gb|AAN10512.1| CG3645, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22945600|gb|AAF51525.2| CG3645, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|19920448|ref|NP_608507.1| CG3645, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|15292203|gb|AAK93370.1| LD42056p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0307923; name=CG3645-PC; parent=FBgn0031238,FBtr0336989; dbxref=REFSEQ:NP_001259809,GB_protein:AGB92346,FlyBase:FBpp0307923,FlyBase_Annotation_IDs:CG3645-PC; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3645 (CG3645, FBgn0031238). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:252589..271732. It has the cytological map location 21B5-21B7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: tRNA dihydrouridine synthase activity; FAD binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction; tRNA processing. 13 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG3645-PB translation from_gene[CG3645 CG3645 FBgn0031238] seq_release:3 mol_weight=58068 cds_boundaries:(2L:252,666..254,379[-]) aa_length:505 transcript_info:[CG3645-RB seq_release:3] gene_info:[gene symbol:CG3645 FBgn0031238 gene_boundaries:(2L:252 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG3645-PA translation from_gene[CG3645 CG3645 FBgn0031238] seq_release:3 mol_weight=58068 cds_boundaries:(2L:252,666..254,379[-]) aa_length:505 transcript_info:[CG3645-RA seq_release:3] gene_info:[gene symbol:CG3645 FBgn0031238 gene_boundaries:(2L:252 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VPM1) CG3645 protein (LD42056p) [DrosMelano7227.FASTAC.txt]
  • CG3645-PB, isoform B [Drosophila melanogaster]gi|22945600|gb|AAF51525.2| CG3645-PA, isoform A [Drosophila melanogaster]gi|15292203|gb|AAK93370.1| LD42056p [Drosophila melanogaster]gi|19920448|ref|NP_608507.1| CG3645-PA [Drosophila melanogaster]gi|2458 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_60850 [fly-100309-contam.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_72261 [fly-100309-contam.fasta]
  • CG3645-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD42056p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3645-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG3645, isoform A OS=Drosophila melanogaster GN=CG3645-RB PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525,FlyMine:FBpp0077799,modMine:FBpp0077799; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(252663..253145,253220..253385,253446..253890,253956..254379); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG3645, isoform A OS=Drosophila melanogaster GN=CG3645-RB PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525,FlyMine:FBpp0077799,modMine:FBpp0077799; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0307923; name=CG3645-PC; parent=FBgn0031238,FBtr0336989; dbxref=REFSEQ:NP_001259809,GB_protein:AGB92346,FlyBase:FBpp0307923,FlyBase_Annotation_IDs:CG3645-PC; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525,FlyMine:FBpp0077799,modMine:FBpp0077799; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0307923; name=CG3645-PC; parent=FBgn0031238,FBtr0336989; dbxref=REFSEQ:NP_001259809,GB_protein:AGB92346,FlyBase:FBpp0307923,FlyBase_Annotation_IDs:CG3645-PC; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0077799 type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525,FlyMine:FBpp0077799,modMine:FBpp0077799; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0077800 type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0307923 type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0307923; name=CG3645-PC; parent=FBgn0031238,FBtr0336989; dbxref=REFSEQ:NP_001259809,GB_protein:AGB92346,FlyBase:FBpp0307923,FlyBase_Annotation_IDs:CG3645-PC; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077799; name=CG3645-PA; parent=FBgn0031238,FBtr0078140; dbxref=GB_protein:AAF51525.2,FlyBase:FBpp0077799,FlyBase_Annotation_IDs:CG3645-PA,REFSEQ:NP_608507,GB_protein:AAF51525,UniProt/TrEMBL:Q9VPM1,FlyMine:FBpp0077799,modMine:FBpp0077799; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0077800; name=CG3645-PB; parent=FBgn0031238,FBtr0078141; dbxref=GB_protein:AAN10512.1,FlyBase:FBpp0077800,FlyBase_Annotation_IDs:CG3645-PB,REFSEQ:NP_722619,GB_protein:AAN10512,UniProt/TrEMBL:Q9VPM1; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:complement(join(253956..254379,253446..253890,253220..253385,252663..253145)); ID=FBpp0307923; name=CG3645-PC; parent=FBgn0031238,FBtr0336989; dbxref=REFSEQ:NP_001259809,GB_protein:AGB92346,FlyBase:FBpp0307923,FlyBase_Annotation_IDs:CG3645-PC,UniProt/TrEMBL:Q9VPM1; MD5=e97d834a86a031380b56afa61318994b; length=505; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA processing [IEA]
    oxidation reduction [IEA]
    Molecular Function: tRNA dihydrouridine synthase activity [IEA]
    FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNDEDAAHQ RPSKPTGYNF YRSSLGSPRY VVAPMVDQSE LAWRMLCRRY GAELCYSPMY  60
   61 HANLFATDPK YRKDALQTCP EDRPLIIQFC GNDAQQILDA ALLAQDHCDA VDINLGCPQA 120
  121 IAKRGHYGSF LQDEWELLTE IVSTLHAKLA VPVTCKIRIF EDLEKTIRYA KMLEAAGCQL 180
  181 LTVHGRTREQ KGPLTGVANW NYIKNVRQHI KIPMLANGNI LALDDVHRCL TETGVDGVMS 240
  241 AEGNLHNPAI FKGVSPPVWQ MAHEYLELVQ LHPCPSSFIR GHLFKLFHHI MNIRQNSELR 300
  301 QYLATANQLV QFQAVVQQVR AKYEPFHKGE VPYEPEQMAA GSEEDLPLSP WLCQPYIRAS 360
  361 PESHRQKIAE KVREAEDPNR TKRQYFDKDG KEISRKRMKK LRRRQRRPNK TEAQIQHRHE 420
  421 RRLEYCSECA NPQGSKCEFQ LCRVCCKDRC YNNDRDCPGH GIFIKSRRAR AKLFEEHIAP 480
  481 QDHQKVTRTS DDDLTIAPTD AQEPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle