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Protein Overview: lt-PA, FBpp03105...

General Information:
Name(s) found: FBpp0310509 [FlyBase]
FBpp0305699 [FlyBase]
lt-PA / FBpp0110417 [FlyBase]
Description(s) found:
Found 35 descriptions.
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  • type=protein; loc=2L:join(22817628..22817657,22817714..22817839,22817892..22818062,22818113..22818230,22818298..22818651,22820170..22820497,22831506..22831574,22831636..22832037,22832086..22832272,22832327..22832566,22832619..22832745,22832805..22833178); ID=FBpp0310509; name=lt-PF; parent=FBgn0002566,FBtr0344082; dbxref=FlyBase:FBpp0310509,FlyBase_Annotation_IDs:CG18028-PF; MD5=839bb7686d13b15ea8105ac46c8aab25; length=841; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(22817628..22817657,22817714..22817839,22817892..22818062,22818113..22818230,22818298..22818651,22820170..22820497,22831506..22831574,22831636..22832037,22832086..22832272,22832327..22832566,22832619..22832745,22832805..22833178); ID=FBpp0305699; name=lt-PE; parent=FBgn0002566,FBtr0333519; dbxref=REFSEQ:NP_001260695,GB_protein:AGB93230,FlyBase:FBpp0305699,FlyBase_Annotation_IDs:CG18028-PE; MD5=839bb7686d13b15ea8105ac46c8aab25; length=841; release=r5.56; species=Dmel; [FlyBase]
  • The gene light is referred to in FlyBase by the symbol Dmel\lt (CG18028, FBgn0002566). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:22817519..22833492. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: dsRNA transport; determination of adult lifespan; ommochrome biosynthetic process. 46 alleles are reported. The phenotypes of these alleles are annotated with: eye; Malpighian tubule; wing; ocellus pigment granule; pigment cell. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 841 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: eye pigment biosynthetic process [NAS]
    vesicle-mediated transport [IEA]
    vacuole organization [NAS]
    ommochrome biosynthetic process [IMP]
    lysosomal transport [TAS]
    intracellular transport [TAS]
    determination of adult lifespan [IMP]
    intracellular protein transport [IEA]
    dsRNA transport [IMP]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKALPLISC DSWADSINEE DVEPKFKYHR LANDLKYMLN ADVITCSAVH LKFLIFGTFR  60
   61 GRVCIFDHQG NSVYSNLSAS ERHTHQVAVN NIDVDHKGEY VATCSDDGKV NITGLFSSDN 120
  121 NHSLSFGKFI KVVSLEPDSK AHIKRFVVGD DKLILYERNL LKKLKPVELC SVEGSVLSIC 180
  181 WHGNFIAWAS HIGVRVYDLN ERCSLGLIKW EVPPQERLEN FRCHLRWSNK HTLLIGWVDT 240
  241 IRVCVIRKRN SIEASTGNLP VYIVDPISTF QTTFYVCGLA PLSAKQLVVL GFRKEKSSCF 300
  301 KALRPVLCVI EYKMNNSEEI CTDSLTLRGF EEYTVNDYSL GGIIEENRFY IVAPKDIVVA 360
  361 SLIETDDRIE WLIKHSKFEE AMELISANGG NVPVLSVAKL YINHLLALKK YDDAAKLCLR 420
  421 MLGNDKVLWE EEVFKFVKCQ QLRSVSAYLP TSDECKLDPH VYEMVLYEFL KFDVCGFLNL 480
  481 IKEWPSHLYD GLAVINAIHD NFRKHYANQL LESLALLYSY QGDFESALRM YLKLQNKDVF 540
  541 QLIRRYELYD VISKLIIPLI QLDRDCAFEI LLDKKKIKTE IVVHQLEHNQ EYLYWYLDSL 600
  601 LKKDPSNVFQ KKLISLYAIF DRNKLLPFLK RSKDYDIQEA LVICKQENFY PEIVYLLGCM 660
  661 GGVEASEALN IIIHRIRDIE MAIEFCKEHD DSDLWNALIN EFSKHPEIVT KVLDGIVDYF 720
  721 SPAVVVGKIK MGQNIPNLRQ SLIKMLRHYN LQGEILSSAQ QIQLNDYFEI HSEIVTTQRR 780
  781 GQQVSYEQLC SLCHRPVLMA GTHLYCIIRL ECGHVYHKPC IQGELLKNCN ECNLWKLTVG 840
  841 K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle