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Protein Overview: CG40127-PA, FBpp...

General Information:
Name(s) found: FBpp0306999 [FlyBase]
CG40127-PA / FBpp0110588 [FlyBase]
Description(s) found:
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  • gi|74865921|sp|Q8MSF5.1|RNK_DROME RecName: Full=Ribonuclease kappa; Short=RNase kappa; Short=RNase K [NCBI NR]
  • gi|62862272|ref|NP_001015283.1| CG40127-PA.3 [Drosophila melanogaster] [NCBI NR]
  • gi|30923682|gb|EAA46159.1| CG40127 [Drosophila melanogaster] [NCBI NR]
  • gi|21430068|gb|AAM50712.1| GM16138p [Drosophila melanogaster] [NCBI NR]
  • gi|116007474|ref|NP_001036433.1| CG40127 [Drosophila melanogaster] [NCBI NR]
  • Ribonuclease kappa OS=Drosophila melanogaster GN=CG40127 PE=3 SV=1 [Swiss-Prot]
  • type=protein; loc=2R:complement(75099..75197,75265..75384,75451..75519); ID=FBpp0306999; name=CG40127-PB; parent=FBgn0262116,FBtr0334986; dbxref=FlyBase:FBpp0306999,FlyBase_Annotation_IDs:CG40127-PB,REFSEQ:NP_001260699,GB_protein:AGB93234; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG40127 (CG40127, FBgn0058127). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:74991..75661. Its molecular function is unknown. The biological processes in which it is involved are not known. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG40127-PA translation from_gene[CG40127 CG40127 FBgn0058127] seq_release:3 mol_weight=10763 cds_boundaries:(2h:632,976..633,393[+]) aa_length:95 transcript_info:[CG40127-RA seq_release:3] gene_info:[gene symbol:CG40127 FBgn0058127 gene_boundaries:(2h [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MSF5) GM16138p (CG40127-PA.3) [DrosMelano7227.FASTAC.txt]
  • CG40127-PA.3 [Drosophila melanogaster]gi|21430068|gb|AAM50712.1| GM16138p [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(75099..75197,75265..75384,75451..75519); ID=FBpp0110588; name=CG40127-PA; parent=FBgn0058127,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA [fly-100309-contam.fasta]
  • GM16138p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG40127-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(75099..75197,75265..75384,75451..75519); ID=FBpp0110588; name=CG40127-PA; parent=FBgn0058127,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(75099..75197,75265..75384,75451..75519); ID=FBpp0110588; name=CG40127-PA; parent=FBgn0058127,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Ribonuclease kappa OS=Drosophila melanogaster GN=CG40127 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(75099..75197,75265..75384,75451..75519); ID=FBpp0110588; name=CG40127-PA; parent=FBgn0262116,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159,FlyMine:FBpp0110588,modMine:FBpp0110588; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0306999; name=CG40127-PB; parent=FBgn0262116,FBtr0334986; dbxref=FlyBase:FBpp0306999,FlyBase_Annotation_IDs:CG40127-PB,REFSEQ:NP_001260699,GB_protein:AGB93234; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0110588; name=CG40127-PA; parent=FBgn0262116,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159,FlyMine:FBpp0110588,modMine:FBpp0110588; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0306999; name=RNASEK-PB; parent=FBgn0262116,FBtr0334986; dbxref=FlyBase:FBpp0306999,FlyBase_Annotation_IDs:CG40127-PB,REFSEQ:NP_001260699,GB_protein:AGB93234; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0110588; name=RNASEK-PA; parent=FBgn0262116,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159,FlyMine:FBpp0110588,modMine:FBpp0110588; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8MSF5, CG40127, isoform B OS=Drosophila melanogaster GN=RNASEK PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0306999 type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0306999; name=RNASEK-PB; parent=FBgn0262116,FBtr0334986; dbxref=FlyBase:FBpp0306999,FlyBase_Annotation_IDs:CG40127-PB,REFSEQ:NP_001260699,GB_protein:AGB93234; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0110588 type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0110588; name=RNASEK-PA; parent=FBgn0262116,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159,FlyMine:FBpp0110588,modMine:FBpp0110588; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0306999; name=RNASEK-PB; parent=FBgn0262116,FBtr0334986; dbxref=FlyBase:FBpp0306999,FlyBase_Annotation_IDs:CG40127-PB,REFSEQ:NP_001260699,GB_protein:AGB93234,UniProt/Swiss-Prot:Q8MSF5; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(4187946..4188014,4187760..4187879,4187594..4187692)); ID=FBpp0110588; name=RNASEK-PA; parent=FBgn0262116,FBtr0111266; dbxref=FlyBase_Annotation_IDs:CG40127-PA,GB_protein:EAA46159.1,FlyBase:FBpp0110588,REFSEQ:NP_001036433,GB_protein:EAA46159,UniProt/Swiss-Prot:Q8MSF5,FlyMine:FBpp0110588,modMine:FBpp0110588; MD5=e12843652a6f3fb42dbc735337c5816c; length=95; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 95 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKICGPKLSL CGLIISVWGI VQLVLMGLFF YINSVALIED LPLEEEYHSL EDFYAAANRA  60
   61 YNQNAYNCWI AACIYVLTLL LSAQQFYMNS RVTAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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