Protein Overview: CORA1_RAT

General Information:
Name(s) found:	CORA1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81912968\|sp\|Q80ZF0.1\|CORA1_RAT RecName: Full=Collagen alpha-1(XXVII) chain; Flags: Precursor [NCBI NR] gi\|38454234\|ref\|NP_942042.1\| collagen, type XXVII, alpha 1 [Rattus norvegicus] [NCBI NR] gi\|28629490\|gb\|AAO43184.1\| collagen type XXVII proalpha 1 chain; proalpha1(XXVII) [Rattus norvegicus] [NCBI NR] Collagen alpha-1(XXVII) chain OS=Rattus norvegicus GN=Col27a1 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):5-85400473 Collagen type XXVII proalpha 1 chain [hmr_yeast5_DM3-1_pombe.fasta] collagen, type XXVII, alpha 1; collagen type XXVII proalpha 1 chain [HMR_022704-rand.fasta] collagen, type XXVII, alpha 1 [Rattus norvegicus]gi\|28629490\|gb\|AAO43184.1\| collagen type XXVII proalpha 1 chain; proalpha1(XXVII) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Collagen type XXVII proalpha 1 chain [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Collagen alpha-1(XXVII) chain precursor [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] collagen, type XXVII, alpha 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] collagen type XXVII proalpha 1 chain; proalpha1(XXVII) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Col27a1 Collagen alpha-1(XXVII) chain [rat-ipi-250309-contam.fasta] Collagen alpha-1(XXVII) chain OS=Rattus norvegicus GN=Col27a1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	1855 amino acids
Gene Ontology:
Cellular Component:	collagen [IEA] fibrillar collagen [UNKNOWN][IEA] extracellular region [IEA]
Biological Process:	cell adhesion [IEA]
Molecular Function:	extracellular matrix structural constituent [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLARATAGL GPCCPPAPAL LGAGLRWGGF LFAWILVSFS CHLASTQGAP EDVDVLQRLG  60
   61 LSWTKAGGGR SPAPPGVIPF PSGFIFTQRA KLQAPTTNVL PTTLGRELAL VLSLCSHRVN 120
  121 HAFLFAIRSR KHRLQLGLQF LPGRTLVHLG PRQSVAFDLD VHDGRWHHLA LELRGRTVTL 180
  181 VTACGQHRVP VPLPSRRDSM LDPQGSFLLG KMNPRAVQFE GALCQFSIHP VAQVAHNYCA 240
  241 HLRERCRQVD TYGPQVGALF PWDSGPAFAL HPEPALLGLG NLTRNPATLG SRPISRGLMV 300
  301 TMAPAVPTKP LRMVHQDVSK LGSSQTPLVP AKQSARKTPS PFPSAALANS TRVFHSAPAQ 360
  361 PRQITATSPT KRPPTKPSVS SLSVTPMKSP QAIQKAGTPS FSRPIPTTQK PTPLTSHPSP 420
  421 SKVSSATVRP VQKTFMTPQP PTLSPQALHP ITGLPKKFTI PTVAKPQSKM TSWASKPVLA 480
  481 RTNVPKALEQ TVVAQSSVSY LGSQTLATAL PPLGVGNSRM MPSTRDSTST PAGSKKITGL 540
  541 EASKKTRHKS SPRKPIPLSS GKTARDASPR DLTTKPSQLS TPALVLAPAH LLSSSPQPTS 600
  601 SSFSFFHLPE PTPFLMLMGP PGSKGDCGLP GPPGLPGLPG SPGPRGPRGP PGPFGNPGLP 660
  661 GPPGAKGQKG DPGLSPGQAH DGAKGNMGLP GLAGNPGPMG RKGHKGHPGA AGHPGEQGQP 720
  721 GPEGSPGAKG YPGRQGFPGP VGDPGPKGSR GYIGLPGLFG LPGSDGERGL PGIPGKRGEM 780
  781 GRPGFPGDFG ERGPPGLDGN PGEIGLPGPP GVLGLLGDMG ALGPVGYPGP KGMKGLMGGV 840
  841 GEPGLKGDKG EQGVPGVSGD PGFQGDKGSH GLPGFPGARG KPGPMGKAGD KGSLGLPGPP 900
  901 GPEGFPGDIG PPGDNGPEGM KGKPGARGLP GPPGQLGPEG DEGPMGPPGV PGLEGQPGRK 960
  961 GFPGRPGLDG SKGEPGDPGR PGPVGEQGLM GFVGLVGEPG IVGEKGDRGV MGPPGAPGPK1020
 1021 GSMGHPGTPG GVGDPGEPGP WGPPGSRGLP GMRGAKGHRG PRGPDGPAGE QGSKGLKGRV1080
 1081 GPRGRPGQPG QQGAAGERGH SGAKGFLGIP GPSGPPGAKG LPGEPGSQGP QGPVGPPGEM1140
 1141 GPKGPPGAVG EPGLPGDSGM KGDLGPLGPP GEQGLIGQRG EPGLEGDLGP VGPDGLKGDR1200
 1201 GDPGPDGEHG EKGQEGLKGE EGLPGPPGIT GVRGREGKPG SQGEKGQRGA KGAKGYQGQL1260
 1261 GEMGIPGDPG PPGTPGPKGS RGTLGPMGAP GRMGAQGEPG LAGYNGHKGI TGPLGPPGPK1320
 1321 GEKGEQGEDG KTEGAPGPPG ERGPVGDRGD RGEPGDPGYP GQEGVQGLRG EPGQQGQPGH1380
 1381 PGPRGRPGPK GSKGEEGPKG KPGKAGASGR RGTQGLQGLP GPRGVVGRQG PEGMAGQDGN1440
 1441 PGRDGRPGYQ GEQGNDGDPG PVGPAGRRGN PGVAGLPGAQ GPPGFKGESG LPGQLGPPGK1500
 1501 RGTEGGTGLP GNQGEPGSKG QPGDSGEMGF PGVAGLFGPK GPPGDIGFKG IQGPRGPPGL1560
 1561 MGKEGIIGPP GMLGPSGLPG PKGDRGSRGD WGLQGPRGPP GPRGRPGPPG PPWHPVQFQQ1620
 1621 DDLEAAFQTW MDAHGAVRLE QGYSYPDQLM LDQGGEIFKT LHYLSNLIQS IKTPLGTKEN1680
 1681 PARVCRDLMD CEQKMADGIY WVDPNLGCSS DTIEVSCNFT HGGQTCLKPI TASKAEFAVS1740
 1741 RVQMNFLHLL SSEGTQHITI HCLNMTVWQE GPARPSARQA VRFRAWNGQV FEAGGQFRPE1800
 1801 VSMDGCKVHD GRWHQTLFTF RTQDPQQLPI VSVDNLPPVS SGKQYRLEVG PACFL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: CORA1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: