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Protein Overview: gi|197246753, gi...

General Information:
Name(s) found: gi|197246753 [NCBI NR]
gi|157820245 [NCBI NR]
gi|149044727 [NCBI NR]
gi|109501050 [NCBI NR]
gi|109500070 [NCBI NR]
gi|109479847 [NCBI NR]
gi|109478586 [NCBI NR]
Description(s) found:
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  • gi|197246753|gb|AAI68684.1| Nuclear DNA binding protein [Rattus norvegicus] [NCBI NR]
  • gi|157820245|ref|NP_001099491.1| nuclear DNA binding protein [Rattus norvegicus] [NCBI NR]
  • gi|149044727|gb|EDL97913.1| similar to small unique nuclear receptor co-repressor (predicted) [Rattus norvegicus] [NCBI NR]
  • gi|109501050|ref|XP_001058059.1| PREDICTED: similar to nuclear DNA-binding protein [Rattus norvegicus] [NCBI NR]
  • gi|109500070|ref|XP_214099.4| PREDICTED: similar to nuclear DNA-binding protein [Rattus norvegicus] [NCBI NR]
  • gi|109479847|ref|XP_001067639.1| PREDICTED: similar to nuclear DNA-binding protein [Rattus norvegicus] [NCBI NR]
  • gi|109478586|ref|XP_001066953.1| PREDICTED: similar to nuclear DNA-binding protein [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):14-88992010;6-122988559 [hmr_yeast5_DM3-1_pombe.fasta]
  • hypothetical protein LOC289810 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • similar to small unique nuclear receptor co-repressor (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: similar to nuclear DNA-binding protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • nuclear DNA binding protein [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=C1d;C1d-ps1 Similar to small unique nuclear receptor co-repressor [rat-ipi-250309-contam.fasta]
  • Nuclear DNA binding protein OS=Rattus norvegicus GN=C1d [011711_HMR.fasta]
  • Nuclear DNA binding protein OS=Rattus norvegicus GN=C1d PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Nuclear DNA binding protein OS=Rattus norvegicus GN=C1d PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 141 amino acids

    Gene Ontology:
    Cellular Component: transcriptional repressor complex [UNKNOWN][IEA]
    Biological Process: negative regulation of transcription [UNKNOWN][IEA]
    Molecular Function: DNA binding [UNKNOWN][IEA]
    ligand-dependent nuclear receptor binding [UNKNOWN][IEA]
    protein binding [UNKNOWN][IEA]
    transcription corepressor activity [UNKNOWN][IEA]
    receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEEMNEDY PVEIHDSLTA LESSLGAVDD MLKTMMSVSR NELLQKLDPL EQAKVDLVSA  60
   61 YTLNSMFWVY LATQGVNPKE HPVKQELERI RVYMNRVKEI TDKKKAAKLD RGAASRFVKN 120
  121 ALWEPKPKNT PKVANKGKSK H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle