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Protein Overview: gi|149065819, gi...

General Information:
Name(s) found: gi|27662966 [NCBI NR]
gi|187937020 [NCBI NR]
gi|187469207 [NCBI NR]
gi|149065822 [NCBI NR]
gi|149065820 [NCBI NR]
gi|149065819 [NCBI NR]
gi|149065818 [NCBI NR]
gi|109482540 [NCBI NR]
Description(s) found:
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  • gi|27662966|ref|XP_216998.1| PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide H [Rattus norvegicus] [NCBI NR]
  • gi|187937020|ref|NP_001120767.1| polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) [Rattus norvegicus] [NCBI NR]
  • gi|187469207|gb|AAI67088.1| Polr3h protein [Rattus norvegicus] [NCBI NR]
  • gi|149065822|gb|EDM15695.1| polymerase (RNA) III (DNA directed) polypeptide H (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149065820|gb|EDM15693.1| polymerase (RNA) III (DNA directed) polypeptide H (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149065819|gb|EDM15692.1| polymerase (RNA) III (DNA directed) polypeptide H (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|149065818|gb|EDM15691.1| polymerase (RNA) III (DNA directed) polypeptide H (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|109482540|ref|XP_001077109.1| PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide H [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):7-110102241;7-110207805 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to RIKEN cDNA 5031409G22 [HMR_022704-rand.fasta]
  • similar to RIKEN cDNA 5031409G22 [Rattus norvegicus]gi|27229271|ref|NP_084505.2| polymerase (RNA) III (DNA directed) polypeptide H [Mus musculus]gi|14789799|gb|AAH10793.1| Polymerase (RNA) III (DNA directed) polypeptide H [Mus musculus]gi|29427995|sp|Q [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide H [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to RIKEN cDNA 5031409G22 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Polr3h protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • polymerase (RNA) III (DNA directed) polypeptide H [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • polymerase (RNA) III (DNA directed) polypeptide H (predicted), isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO RIKEN CDNA 5031409G22 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide H [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Polr3h Polr3h protein [rat-ipi-250309-contam.fasta]
  • DNA-directed RNA polymerase III subunit RPC8 [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Polr3h protein OS=Rattus norvegicus GN=Polr3h [011711_HMR.fasta]
  • Polr3h protein OS=Rattus norvegicus GN=Polr3h PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Polr3h protein OS=Rattus norvegicus GN=Polr3h PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: DNA-directed RNA polymerase III complex [UNKNOWN][IEA]
    nucleoplasm [UNKNOWN][IEA]
    Biological Process: transcription [IEA]
    transcription from RNA polymerase III promoter [UNKNOWN][IEA]
    nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [UNKNOWN]
    Molecular Function: DNA binding [IEA]
    DNA-directed RNA polymerase activity [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVLVEMVDT VRIPPWQFER KLNDSIAEEL NKKLANKVVY NVGLCICLFD ITKLEDAYVF  60
   61 PGDGASHTKV HFRYVVFHPF LDEILIGKIK GCSPEGVHVS LGFFDDILIP PESLQQPAKF 120
  121 DEAEQVWVWE YETEEGAHDL YMDTGEEIRF RVVDESFVDT SPTGPSSAEA ASSSEELPKK 180
  181 EAPYTLVGSI SEPGLGLLSW WTSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] PSI-BLAST 32.221849 No description for 2ckzB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle