Protein Overview: gi|109489395, gi...

General Information:
Name(s) found:	gi\|34875128 [NCBI NR] gi\|157818699 [NCBI NR] gi\|149054798 [NCBI NR] gi\|109492247 [NCBI NR] gi\|109489395 [NCBI NR]
Description(s) found: SHOW ONLY BEST	ref\|XP_340938.1\| similar to CG5626-PA [Rattus norvegicus] [NCBI NR] gi\|157818699\|ref\|NP_001103046.1\| tRNA splicing endonuclease 54 homolog [Rattus norvegicus] [NCBI NR] gi\|149054798\|gb\|EDM06615.1\| rCG32786, isoform CRA_b [Rattus norvegicus] [NCBI NR] gi\|109492247\|ref\|XP_001081696.1\| PREDICTED: similar to tRNA-splicing endonuclease subunit Sen54 (tRNA-intron endonuclease Sen54) [Rattus norvegicus] [NCBI NR] gi\|109489395\|ref\|XP_001074043.1\| PREDICTED: similar to tRNA-splicing endonuclease subunit Sen54 (tRNA-intron endonuclease Sen54) [Rattus norvegicus] [NCBI NR] Ensembl_locations(Chr-bp):10-103960372 [hmr_yeast5_DM3-1_pombe.fasta] similar to CG5626-PA [HMR_022704-rand.fasta] similar to CG5626-PA [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 59 kDa protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 Similar to CG5626-PA [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] tRNA splicing endonuclease 54 homolog [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] rCG32786, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] PREDICTED: similar to tRNA-splicing endonuclease subunit Sen54 (tRNA-intron endonuclease Sen54) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SIMILAR TO CG5626-PA [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Tsen54 tRNA splicing endonuclease 54 homolog [rat-ipi-250309-contam.fasta] RCG32786, isoform CRA_b OS=Rattus norvegicus GN=Tsen54 [011711_HMR.fasta] RCG32786, isoform CRA_b OS=Rattus norvegicus GN=Tsen54 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Tsen54 OS=Rattus norvegicus GN=Tsen54 PE=4 SV=1 [Aridor_1205.fasta]
Organism:	Rattus norvegicus
Length:	525 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	tRNA splicing, via endonucleolytic cleavage and ligation [UNKNOWN]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPESEPASV EVPAGRVLSA SELRAARSRS QKLPQRSHGP KDFLPDGSEA QAERLRLCRQ  60
   61 ELWQLLAEER VERLGSLVAA EWRPEEGFVE LTSPAGKFWQ TMGYSEEGRQ RLHPEEALYL 120
  121 LECGSIQLFY QDLPLSIQEA YQLLLTEDTL SFLQYQVFSH LKRLGYVVRR FQLSSVVSPY 180
  181 ERQLNLDGYA QCLEDGSGKR KRSSSCRSVN KKAKALQNSL PPVSLADSSP PACDQSSPYP 240
  241 EEKPRDSSPE QGSELPMQFL GSPEPCPDPG REDAGCDQES DKIENGAKGT PKPRWNFERI 300
  301 SFPNMASDSR HTLLPAPAPE LLPVNVIGRG TDAESWCQKL NQRREKLSRR DREQQAEVRQ 360
  361 FREDVNADPE VQGCSTWQEY KELLRRRQMQ RSQPRPPHLW GQSVTPLLNP DTADSPAAVL 420
  421 QRISVLQTTH LADGGYRLLE KSGGLEISFD VYQADAVATF RKNSPGKPYV RMCISGFDEP 480
  481 VPDLCSLKRL TYQSGDVPLI FALVDHGDIS FYSFRDFTLP QDLGH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|109489395, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: