YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|109476905, gi...

General Information:
Name(s) found: gi|149035684 [NCBI NR]
gi|149035682 [NCBI NR]
gi|109476905 [NCBI NR]
gi|109476903 [NCBI NR]
gi|109476901 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|149035684|gb|EDL90365.1| rCG50351, isoform CRA_b [Rattus norvegicus] [NCBI NR]
  • gi|149035682|gb|EDL90363.1| rCG50351, isoform CRA_b [Rattus norvegicus] [NCBI NR]
  • gi|109476905|ref|XP_001062464.1| PREDICTED: similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 3 [Rattus norvegicus] [NCBI NR]
  • gi|109476903|ref|XP_001062407.1| PREDICTED: similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 2 [Rattus norvegicus] [NCBI NR]
  • gi|109476901|ref|XP_001062349.1| PREDICTED: similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 1 [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):5-154658564 [hmr_yeast5_DM3-1_pombe.fasta]
  • rCG50351, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 3 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=- similar to RING finger protein 11 (NEDD4 WW domain-binding protein 2) (Sid 1669) isoform 1 [rat-ipi-250309-contam.fasta]
  • RCG50351, isoform CRA_b OS=Rattus norvegicus GN=Rnf11 [011711_HMR.fasta]
  • RCG50351, isoform CRA_b OS=Rattus norvegicus GN=Rnf11 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 154 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [UNKNOWN]
    Biological Process: protein ubiquitination during ubiquitin-dependent protein catabolic process [UNKNOWN]
    ubiquitin-dependent protein catabolic process [UNKNOWN]
    Molecular Function: zinc ion binding [IEA]
    protein binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNCLKSPTS DDISLLHESQ SDRASFGEGT EPDQEPPPPY QEQVPVPVYH PTPSQTRLAT  60
   61 QLTEEEQIRI AQRIGLIQHL PKGVYDPGRD GSEKKIRECV ICMMDFVYGD PIRFLPCMHI 120
  121 YHLDCIDDWL MRSFTCPSCM EPVDAALLSS YETN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 11.0 Solution structure of RING finger in RING finger protein 38


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle