Protein Overview: IF172_RAT

General Information:
Name(s) found:	IF172_RAT [Swiss-Prot]
Description(s) found: Found 16 descriptions. SHOW ALL	Intraflagellar transport protein 172 homolog OS=Rattus norvegicus GN=Ift172 PE=1 SV=1 [Swiss-Prot]
Organism:	Rattus norvegicus
Length:	1749 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] cilium [ISS]
Biological Process:	negative regulation of transcription from RNA polymerase II promoter [IDA] neural tube formation [UNKNOWN] multicellular organismal development [IEA] cilium assembly [ISS] protein processing [UNKNOWN] determination of left/right symmetry [UNKNOWN] dorsal/ventral pattern formation [UNKNOWN]
Molecular Function:	protein binding [IDA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM  60
   61 KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120
  121 PAEYIIVFGL AEGKVRLANT KTNKSSTIYG TDSYVVALTT NCSGKGILSG HADGTIVRYF 180
  181 FDDEGSGESQ GKLVNHPCPP YALAWATNSI VAAGCDRRIV AYGKEGHVLQ TFDYSRDPQE 240
  241 REFTTAAASP GGQSVVLGSY DRLRVFNWSP RRSIWEEAKP KEIANLYTVT ALAWKRDGSR 300
  301 LCAGTLCGGV EQFDCCLRRS IYKNKFELTY VGPSQLIVKN LSSGTRVVLK SHYGYEVEEV 360
  361 KILGKERYLV AHTSDTLLLG DLNTNRLSEI PWQGSGGNEK YFFENENVCM IFNAGELTLV 420
  421 EYGSNDSLGS VRTEFMNPHL ISVRINERCQ RGMEDNKKLA YLVDIKTIAI VDLIGGYNIG 480
  481 TISHESRVDW LELNETGHKL LFRDRKLRLH LYDIESCSKT MILNFCSYVQ WVPGSDVLVA 540
  541 QNRNSLCVWY NIEAPERVTM SSIRGDVVGL ERGGGKTEVM VTEGVTTVAY TLDEGLIEFG 600
  601 TAIDDGNYTR ATAFLETLEM TPETEAMWKT LSKLALEARQ LHTAERCFSA LGHVAKARFL 660
  661 HETNEIADQV SREYGGEGTD FYQVRARLAM LEKNYKLAEM IFLEQNAVEE AMDMYQELHR 720
  721 WDECIAVAEA KGHPALEKLR RDYYQRLMDT QQEERAGELQ ESQGDGLAAI SLYLKAGLPA 780
  781 KAARLVLTRE ELLANTELVE HITTALIKGE LYERAGDLFE KIRNPQRALE CYCKGNAFMK 840
  841 AVELARLAFP VEVVRLEEAW GDHLVQQKQL DAAINHYIEA RCSIKAIEAA LGARQWKKAI 900
  901 YILDLQDRNT ASKYYPRVAQ HYASLQEYEI AEELYTKGDR TKDAIDMYTQ AGRWEQAHKL 960
  961 AMKCMRPEDV SVLYITQAQE MEKQGKYREA ERLYVTVEEP DLAITMFKKH KLYDDMIRLV1020
 1021 GKHHPDLLSD THLHLGKELE TEGRLQEAEY HYLEAQEWKA TVNMYRSSGL WEEAYRVAKA1080
 1081 HGGANAHKHV AYLWAKSLGG EAAVRLLNKL GLLEAAIDHA ADNCSFEFAF ELSRLALKHK1140
 1141 TPEIHLRYAM YLEDEGKFEE AEAEFIRAGK PKEAVLMFVH NQDWEAAQRV AEAHDPDSVA1200
 1201 EVLVGQARGA LEEKDFQKAE GLLLRAQRPG LALNYYKEAG LWSDALRICK DYVPGQLEAL1260
 1261 QEEYEREATK KGGRGVEGLV EQARQWEQAG EYSRAVDCYL KVRDSGSSGL MEKCWMKAAE1320
 1321 LSIKFLPPQR SLEVVRVVGP QLIGIGKHSA SAELYLNLDL VKEAIDAFIE GEEWNKAKRV1380
 1381 AKELDPRYED YVDQHYKEFL KNQGKVDSLV GVDVVAALDL YVEQGQWDKC IETATKQNYK1440
 1441 ILHKYVALYA THLIREGGYA QALALYVQHG APANPQNFNI YKRIFTDMVS SPGTNNAEAY1500
 1501 HSWADLRDVL FNLCENLVKS SEANSAAHEE FEMMLLIAHY YATRSAAQSI KQLETVAARL1560
 1561 SVSLLRHTQL LPADKAFYEA GTAAKEVGWE NMAFIFFNRF LDLTDAIEEG TLDALDHSDF1620
 1621 QDTDIPFEVP LPAKQHVPEA QREEVRDWVL TVSMDQRLEQ VLPRDERGVY EASLVAASTG1680
 1681 VRALPCLITG YPILRNKIEF KRPGKAANKD NWNKFLMAIK TSHSPVCQDV LKFISQWCGG1740
 1741 LPSTSFSFQ

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.91

Protein Overview: IF172_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: