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Protein Overview: gi|13242289, gi|...

General Information:
Name(s) found: gi|13242289 [NCBI NR]
gi|12275947 [NCBI NR]
Description(s) found:
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  • ref|NP_077360.1| PDRP protein [Rattus norvegicus] [NCBI NR]
  • gi|12275947|gb|AAG50204.1| PDRP [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):10-10988188 PDRP [hmr_yeast5_DM3-1_pombe.fasta]
  • PDRP protein [HMR_022704-rand.fasta]
  • PDRP protein [Rattus norvegicus]gi|12275947|gb|AAG50204.1| PDRP [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PDRP [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • (NM_024384) PDRP protein [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • PDRP [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Thoc6 PDRP [rat-ipi-250309-contam.fasta]
  • PDRP OS=Rattus norvegicus GN=Thoc6 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 104 amino acids

    Gene Ontology:
    Cellular Component: THO complex [UNKNOWN]
    transcription export complex [UNKNOWN]
    THO complex part of transcription export complex [UNKNOWN][IEA]
    Biological Process: mRNA export from nucleus [UNKNOWN]
    RNA splicing [IEA]
    intronless viral mRNA export from host nucleus [UNKNOWN][IEA]
    mRNA processing [IEA]
    transport [IEA]
    mRNA transport [IEA]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSAQGPTMG AGLDAWQLTQ TGWSVEGAQP SPSGTSGLPH PLRSLPFEHH RNMSPSTGPD  60
   61 LSAGQGCCVN HWQLSGSLRP GAGSSPGLLS LSLNQQPAAP ECKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle