Protein Overview: CAD23_RAT

General Information:
Name(s) found:	CAD23_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|17865345\|ref\|NP_446096.1\| cadherin 23 (otocadherin) [Rattus norvegicus] [NCBI NR] gi\|17365948\|sp\|P58365.1\|CAD23_RAT RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags: Precursor [NCBI NR] gi\|14625443\|dbj\|BAB61904.1\| KIAA1774 protein [Rattus norvegicus] [NCBI NR] (P58365) Cadherin-23 precursor (Otocadherin) [Swiss-Prot] Cadherin-23 OS=Rattus norvegicus GN=Cdh23 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):20-44158389 Cadherin 23 precursor [hmr_yeast5_DM3-1_pombe.fasta] cadherin related 23; Waltzing [HMR_022704-rand.fasta] cadherin related 23 [Rattus norvegicus]gi\|17365948\|sp\|P58365\|CADN_RAT Cadherin-23 precursor (Otocadherin)gi\|14625443\|dbj\|BAB61904.1\| KIAA1774 protein [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Cadherin-23 precursor [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_053644) cadherin related 23; Waltzing [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Cadherin-23 precursor (Otocadherin) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] cadherin 23 (otocadherin) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] KIAA1774 protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Cdh23 Cadherin-23 [rat-ipi-250309-contam.fasta] cadherin-23 precursor [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Cadherin-23 OS=Rattus norvegicus GN=Cdh23 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	3317 amino acids
Gene Ontology:
Cellular Component:	microtubule basal body [UNKNOWN] cilium [UNKNOWN] integral to membrane [IEA] stereocilium [UNKNOWN] synapse [UNKNOWN] photoreceptor inner segment [UNKNOWN] stereocilium bundle tip [UNKNOWN] plasma membrane [IEA]
Biological Process:	auditory receptor cell stereocilium organization [UNKNOWN] righting reflex [UNKNOWN] inner ear development [UNKNOWN] cell adhesion [IEA] adult locomotory behavior [UNKNOWN] homophilic cell adhesion [IEA] sensory perception of sound [UNKNOWN] locomotory behavior [UNKNOWN] auditory receptor cell differentiation [UNKNOWN] photoreceptor cell maintenance [UNKNOWN] inner ear morphogenesis [UNKNOWN] post-embryonic organ morphogenesis [UNKNOWN] equilibrioception [UNKNOWN] sensory perception of light stimulus [UNKNOWN] detection of mechanical stimulus involved in sensory perception of sound [TAS]
Molecular Function:	protein binding [UNKNOWN] calcium ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHPPVTWCA MLWLLMLVSG SWGQVNRLPF FTNHFFDTYL LISEDTPVGS SVTQLLARDM  60
   61 DNDPLVFGVS GEEASRFFAV EPDTGVVWLR QPLDRETKSE FTVEFSVSDH QGVITRKVNI 120
  121 QVGDVNDNAP TFHNQPYSVR IPENTPVGTP IFIVNATDPD LGAGGSVLYS FQPPSQFFAI 180
  181 DSARGIVTVI RELDYEVTQA YQLTVNATDQ DKTRPLSTLA NLAIIITDVQ DMDPIFINLP 240
  241 YSTNIYEHSP PGTTVRVITA VDQDKGRPRG IGYTIVSGNT NSIFALDYIS GALTLNGLLD 300
  301 RENPLYSHGF ILTVKGTELN DDRSPSDATV TTTFNILVID INDNAPEFNS SEYSVAITEL 360
  361 AQVGFALPLF IQVVDKDEGL NSMFEVYLVG NNSHHFIISP TSVQGKADIR IRVAIPLDYE 420
  421 TVDRYDFDLF ANESVPDHVG YAKVKITLIN ENDNRPIFSQ PLYNVSLYEN ITVGTSVLTV 480
  481 LATDNDVGTF GEVNYFFSDD PDRFSLDKDT GLIMLIARLD YELIQRFTLT VIARDGGGEE 540
  541 TTGRVRINVL DVNDNVPTFQ KDAYVGALRE NEPSVTQLVR LRATDEDSPP NNLITYSIVN 600
  601 ASAFGSYFDI SVYEGYGVIS VSRPLDYEQI PNGLIYLTVM AKDAGNPPLY STVPVTIEVF 660
  661 DENDNPPTFS KPAYFVSVVE NIMAGATVLF LNATDLDRSR EYGQESIIYS LEGSSQFRIN 720
  721 ARSGEITTTS LLDRETKAEY ILIVRAVDGG VGHNQKTGIA TVNVTLLDIN DNHPTWKDAP 780
  781 YYINLVEMTP PDSDVTTVVA VDPDLGKNGT LVYSIQPPNK FYSLNSTTGK IRTTHVMLDR 840
  841 ENPDPVEAEL MRKIIVSVTD CGRPPLKATS SATVFVNLLD LNDNDPTFQN LPFVAEVLEG 900
  901 TPAGVSVYQV VAIDLDEGLN GLVSYRMQVG MPRMDFVINS TSGVVTTTAE LDRERIAEYQ 960
  961 LRVVASDAGT PTKSSTSTLT IRVLDVNDET PTFFPAVYNV SVSEDVPREF RVVWLNCTDN1020
 1021 DVGLNAELSY FITAGNVDGK FSVGYRDAVV RTVVGLDRET TAAYTLVLEA IDNVPVGKRR1080
 1081 TGTATVFVTV LDVNDNRPIF LQSSYEASVP EDIPEGHSIV QLKATDADEG EFGRVWYRIL1140
 1141 HGNHGNNFRL HVSSGLLVRG PRPLDRERNS SHVLMAEAYN HDLGPMRSSV RVIVYVEDVN1200
 1201 DEAPVFTQQQ YNRLGLRETA GIGTSVIVVR ATDRDTGDGG LVNYRILSGA EGKFEIDEST1260
 1261 GLIVTVDYLD YETKTSYLMN VSATDGAPPF NQGFCSVYVT LLNELDEAVQ FSNASYEAVI1320
 1321 MENLALGTEI VRVQAYSIDN LNQITYRFDA YTSAQAKALF KIDAITGVIT VKGLVDREKG1380
 1381 DFYTLTVVAD DGGPKVDSTV KVYVTVLDEN DNSPRFDFTS DSAISVPEDC PVGQRVATVK1440
 1441 ARDPDAGSNG QVVFSLASGN IAGAFEIITS NDSIGEVFVA KPLDREELDH YILKIVASDR1500
 1501 GTPPRKKDHI LQVTILDVND NPPVIESPFG YNVSVNENVG GGTSVVQVRA TDRDIGINSV1560
 1561 LSYYITEGNE DMTFRMDRIS GEIATRPAPP DRERQNFYHL VVTVEDEGTP TLSATTHVYV1620
 1621 TIVDENDNAP VFQQPHYEVV LDEGPDTVNT SLITVQALDL DEGPNGTVTY AIVAGNIINT1680
 1681 FRINRRTGVI TAAKELDYEI SHGRYTLIVT ATDQCPILSH RLTSTTTVLV NVNDINDNVP1740
 1741 TFPRDYEGPF DVTEGQPGPR VWTFLAHDRD SGPNGQVEYS VVDGDPLGEF VISPVEGVLR1800
 1801 VRKDVELDRE TIAFYNLTIC ARDRGVPPLS STMLVGIRVL DINDNDPVLL NLPMNITISE1860
 1861 NSPVSSFVAH VLASDADSGC NALLTFNITA GNRERAFFIN ATTGIVTVNR PLDRERIPEY1920
 1921 RLTVSVKDNP ENPRIARKDF DLLLVSLADE NDNHPLFTEG TYQAEVMENS PAGTPLTVLN1980
 1981 GPILALDADE DVYAVVTYQL LGTHSDLFVI DNSTGVVTVR SGVIIDREAF SPPFLELLLL2040
 2041 AEDVGQLNGT AYLFITILDD NDNWPTFSPP AYTVHLLENC PPGFSVLQIT ATDEDSGLNG2100
 2101 ELVYRIEAGA QDRFLIHPVT GVIRVGNATI DREEQESYRL TVVATDRGTV PLSGTATVTI2160
 2161 LIDDINDSRP EFLNPIQTVS VLESTEPGTV IANVTAIDLD LNPKLEYHIL SIVAKDDTDR2220
 2221 LVPDQEDAFA VNINTGSVIV KSPLNRELVA TYEVTLSVID NASDLPERSV SVPNAKLTVN2280
 2281 ILDVNDNTPQ FKPFGITYYT ERVLEGATPG TTLIAVAAVD PDKGLNGLIT YTLLDLIPPG2340
 2341 YVQLEDSSAG KVIANRTVDY EEVHWLNFTV RASDNGSPPR AAEIPVYLEI VDINDNNPIF2400
 2401 DQLSYQEAVF EDVAVGTVIL RVTATDADSG NFALIEYSLV DGEGKFAINP NTGDIYVLSS2460
 2461 LDREKKDHYI LTALAKDNPG DVASNRRENS VQVVIRVLDV NDCRPQFSKP QFSTSVYENE2520
 2521 PAGTSVITML ATDQDEGSNG QLTYSLEGPG MEAFSVDMDS GLVTTQRPLQ SYERFNLTVV2580
 2581 ATDGGEPPLW GTTMLLVEVI DVNDNRPVFV RPPNGTILHI KEEIPLRSNV YEVYATDKDE2640
 2641 GLNGAVRYSF LKSTGNRDWE YFTIDPISGL IQTAQRLDRE KQAVYSLILV ASDLGQPVPY2700
 2701 ETMQPLQVAL EDIDDNEPLF VRPPKGSPQY QLLTVPEHSP RGTLVGNVTG AVDADEGPNA2760
 2761 IVYYFIAAGN EDKNFHLQPD GRLLVLRDLD RETEAIFSFI VKASSNRSWT PPRGPSPALD2820
 2821 LLTDLTLQEV RVVLEDINDQ PPRFTKAEYT AGVATDAKVG SELIQVLALD ADIGNNSLVF2880
 2881 YGILAIHYFR ALANDSEDVG QVFTMGSVDG ILRTFDLFMA YSPGYFVVDI VARDLAGHND2940
 2941 TAIIGIYILR DDQRVKIVIN EIPDRVRGFE EEFIRLLSNI TGAIVNTDDV QFHVDMKGRV3000
 3001 NFAQTELLIH VVNRDTNRIL DVDRVIQMID ENKEQLRNLF RNYNVLDVQP AISVQLPDDM3060
 3061 SALQMAIIVL AILLFLAAML FVLMNWYYRT IHKRKLKAIV AGSAGNRGFI DIMDMPNTNK3120
 3121 YSFDGANPVW LDPFCRNLEL AAQAEHEDDL PENLSEIADL WNSPTRTHGT FGREPAAVKP3180
 3181 EDDRYLRAAI QEYDNIAKLG QIIREGPIKL IHTDLEEEPG DHSPGQGSLR FRHKPPTELK3240
 3241 GPDGIHIVHG STGTLLATDL NSLPEDDQKG LDRSLETLTA SEATAFERNA RTESAKSTPL3300
 3301 HKLRDVIMES PLEITEL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: CAD23_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: