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Protein Overview: gi|62654502, gi|...

General Information:
Name(s) found: gi|62654502 [NCBI NR]
gi|27721799 [NCBI NR]
gi|109485607 [NCBI NR]
gi|109484106 [NCBI NR]
Description(s) found:
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  • gi|62654502|ref|XP_576487.1| PREDICTED: similar to small nuclear ribonucleoprotein E [Rattus norvegicus] [NCBI NR]
  • ref|XP_236711.1| similar to small nuclear ribonucleoprotein E [Rattus norvegicus] [NCBI NR]
  • gi|109485607|ref|XP_001077949.1| PREDICTED: similar to small nuclear ribonucleoprotein E [Rattus norvegicus] [NCBI NR]
  • gi|109484106|ref|XP_001064438.1| PREDICTED: similar to small nuclear ribonucleoprotein E [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):8-128404342 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to small nuclear ribonucleoprotein E [HMR_022704-rand.fasta]
  • similar to small nuclear ribonucleoprotein E [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to small nuclear ribonucleoprotein E [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to Small nuclear ribonucleoprotein E [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • PREDICTED: similar to small nuclear ribonucleoprotein E [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO SMALL NUCLEAR RIBONUCLEOPROTEIN E [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Snrpe similar to small nuclear ribonucleoprotein E [rat-ipi-250309-contam.fasta]
  • Uncharacterized protein OS=Rattus norvegicus GN=Snrpe [011711_HMR.fasta]
  • Uncharacterized protein OS=Rattus norvegicus GN=LOC100360682 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Protein LOC100360682 OS=Rattus norvegicus GN=LOC100360682 PE=4 SV=1 [Aridor_1205.fasta]
  • Uncharacterized protein OS=Rattus norvegicus GN=LOC100360682 [120808_122_R_norvegicus.fasta]
  • Protein LOC100361838 OS=Rattus norvegicus GN=LOC100361838 PE=4 SV=1 [20141208_RAT.fasta]
    • Organism: Rattus norvegicus
    Length: 92 amino acids

    Gene Ontology:
    Cellular Component: cytosol [UNKNOWN]
    U7 snRNP [UNKNOWN]
    nucleoplasm [UNKNOWN]
    Biological Process: RNA splicing [UNKNOWN]
    spliceosomal snRNP assembly [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYLGQGQKV QKVMVQPINL IFRYLQNRSR IQVWLYEQVN MRIEGCIIGF DEYMNLVLDD  60
   61 AEEIHSKTKS RKQLGRIMLK GDNITLLQSV SN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle