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Protein Overview: gi|116310433

General Information:
Name(s) found: gi|116310433 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|116310433|emb|CAH67439.1| H0501D11.3 [Oryza sativa (indica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 748 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVADLENPT SRSSSQKSSR RSGSRRSQKS AGQQSSPTVF PEKKGKSKSS RQKHLVFDNK  60
   61 DSKKAKNNEQ KNDVVDEKSN FSGYEIYSGK LFFDKKNRIT GDQISANGKA DISDVRLTSK 120
  121 ALIWGSSLLS LEDVISVSYS SGVQHFIVHA YPSKKYLFGK THRVRKDLRF IAPTVEEAIS 180
  181 WVTCFAEQNI YVNMLPLPPT SSTEQDLDGP LSGALFDHPP IKCRTPPRIL VILNPRSGHG 240
  241 RSCKVFHDKA EPIFKLAGFH MEVVKTTHAG HAKSLASTFD FSAFPDGIVC VGGDGIVNEV 300
  301 FNGLLSRSDR AEAVSIPVGI IPAGSDNSLV WTVLGVKDPI SASLLIVKGG FTALDILSVE 360
  361 WIQSGLIHFG TTVSYYGFIS DVLELSEKYQ KKFGPLRYFV AGILKFFCLP SYFYELEYLP 420
  421 SSKEMTGHGK GIGQENFVSD VYTNVMRSRS KREGIPRASS LSSIDSIMTP SRMSLGDVDT 480
  481 SGSTAASTEP SEYVRGLDPK AKRLSLGRSN IVSEPEEVLH PQPHHSSFWP RTRSKTRTER 540
  541 NSVGVTTNDT RLSWAAPSIH DKEDISSTIS DPGPIWDSEP KWDNGPKWDT ELTWESDHPI 600
  601 ELPGPPEDNE IGPSVELVPN LDDKWVVRKG HFLGVLVCNH SCKTVQSLSS QVIAPKANHD 660
  661 DNTLDLLLVG GKGRWKLLKF FILLQFGRHL SLPYVEYVKV KSVKLKPGAN THNGCGIDGE 720
  721 LCRVKGHVLC SLLQEQCMLI GRQSRQST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] deduced N/A No confident structure predictions are available.
    2 View Details [111..225] PSI-BLAST 12.0 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
    3 View Details [226..540] PSI-BLAST 37.69897 No description for 2jgrA was found.
    4 View Details [541..748] FFAS03 2.66 No description for 2bonA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle