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Protein Overview: gi|125527707

General Information:
Name(s) found: gi|125527707 [NCBI NR]
Description(s) found:
  • gi|125527707|gb|EAY75821.1| hypothetical protein OsI_03735 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 233 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAIAASAF LSSAFARDRP LPRQRRAARP ATRRAAAGGL SVRCEQSEKQ KRQPLSALVP  60
   61 REQRFMFEGD ELCGPDIWNT TWYPKAADHV TTEKTWYVVD ATDKILGRLA STIAVHIRGK 120
  121 NEATYTPSVD MGAFVVVVNA EKVAVSGKKR SQKLYRRHSG RPGGMKEETF DQLQKRIPER 180
  181 IIEHAVRGML PKGRLGRRLF THLKVYKGAE HPHEAQKPVP LPIKDKRIQK SEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] PSI-BLAST 52.522879 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.0286073270483 bayes_pls_golite062009
  • structural molecule activity
    		•  9.45133141168812 bayes_pls_golite062009
  • binding
    		•  1.22159759850364 bayes_pls_golite062009
  • RNA binding
    		•  0.840527362301162 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.592978734154454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle