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Protein Overview: gi|125528499

General Information:
Name(s) found: gi|125528499 [NCBI NR]
Description(s) found:
  • gi|125528499|gb|EAY76613.1| hypothetical protein OsI_04563 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRSIVRDV RDGFGSLSRR SFEVTLASLY GLTGHHKGKT QSSLDELDDS PAIIPESRWA  60
   61 SLPPELLREV IRRLEADEST WPSRRNVVCF AAVCRTWREM CKETVLSPEF CGKLTFPVSI 120
  121 KQPGPRDGMI QCYIKRNRSK STYHLYLCLS NVVTAEGGKF VLAAKRHRKT TCTEYTISMV 180
  181 SGNISRSSRT NIGKLRSNFL GTKFIIYDTQ PPYNGAVVPH VGRTSKRFNS TKVSPKVPSV 240
  241 TYNIAQVSYE LNVLGTRGPR RMRCMMHSIP ASSVEPGGIV PGQPEQIVPR ALEDSFRSTT 300
  301 SFSQSFRSTT SFSKSIMDPS MDFSSARFSD ISGSIMGGDD NGEIKERPLV LRNKPPRWHE 360
  361 QLQCWCLNFR GRVTIASVKN FQLVAAPSPP PAGAPTPSQP GPADPEKVIL QFGKVARDMF 420
  421 TMDYRYPLSA FQAFAICLSS FDTKLACE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] FFAS03 1.97 No description for 2e31A was found.
    2 View Details [112..448] PSI-BLAST 104.0 Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle