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Protein Overview: gi|125546007

General Information:
Name(s) found: gi|125546007 [NCBI NR]
Description(s) found:
  • gi|125546007|gb|EAY92146.1| hypothetical protein OsI_13858 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLAVLQWW LGAMVAMAAA ASWSGGVLPA AEALGMNWGT QASHPLPPKI VAQLLQDNGI  60
   61 KKVKLFDADQ DTLSALAGTG IEVMVAIPNV MLDSITDYDT AKEWVRRNVS RYNFDGGVTI 120
  121 KYVAVGNEPF LAAYNGTFDK VTLPALMNIQ NALNDAGLGD SIKATVPLNA DVYDSPQDQQ 180
  181 VPSAGRFRAD IADLMTQMVQ FLANNSAPFT VNIYPFISLY LNDDFPVDFA FFDGGATPVV 240
  241 DNGISYTNVF DANFDTLVAA LKGVGHGDMP IVVGEVGWPT DGDKHATATY AQRFYNGLLK 300
  301 RLAANAGTPA RPGQYIEVYL FGLLDEDAKS VAPGDFERHW GILRFDGQPK YPVDLTGQGQ 360
  361 NTMLVPAKGV TYLPRTWCVI NTNAKDTSKL ADNINFACTF ADCTALGYGS TCAGMDANGN 420
  421 ASYAFNAYFQ VQNQKDDACD FQGLAMPTQT DPSTPACNFT IQIAATSAGH RRRAGAAVLA 480
  481 LLALFRLFLL H

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 81.0 Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
    2 View Details [366..491] Pfam 38.065502 No description for PF07983.4 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle