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Protein Overview: gi|125524981

General Information:
Name(s) found: gi|125524981 [NCBI NR]
Description(s) found:
  • gi|125524981|gb|EAY73095.1| hypothetical protein OsI_00971 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSRLLTPR ILLDTTAVFP PSSSVVAPSL SRQLRCTRTG GSPPAPPHRL VARRAMSNGA  60
   61 AEPAIYGGGG GAQQAASSAA ARRVTLATLR GKHRRGEPIS MVTAYDYPSG VHVDAAGFDI 120
  121 CLVGDSAAMV AHGHDNTLPI SLDLMIEHCR AVARGAARTF LVGDLPFGSY EASTAQAVGS 180
  181 AVRVMKEGGV NSIKLEGSAP SRISAARAIV DAGIAVMGHI GLTPQSVSAL GGFRPQGKTV 240
  241 ESAVKVVEAA LALQEAGCFA VVLECVPAPV AAAATSALTI PTIGIGAGPF CSGQVLVYHD 300
  301 LLGTFQTSHA KVSPKFCKQY GNIGDVINRA LSKYKQEVET QSFPGPSHTP YKLAATDVDA 360
  361 FLNALKMKGL NVAADAAADA VEYTDEKEIN GTPQLKVYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..399] PSI-BLAST 90.0 Ketopantoate hydroxymethyltransferase PanB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
    		•  4.08693637310631 bayes_pls_golite062009
  • catalytic activity
    		•  2.59838799615646 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  2.05689968523792 bayes_pls_golite062009
  • transferase activity
    		•  1.07154136609184 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.646649320021871 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.366715189574293 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.0960362356555544 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.0846611486307003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle