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Protein Overview: gi|254848002, gi...

General Information:
Name(s) found: gi|254848002 [NCBI NR]
gi|254843707 [NCBI NR]
gi|125619738 [NCBI NR]
Description(s) found:
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  • gi|254848002|ref|ZP_05237352.1| zinc-binding domain-containing protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|254843707|gb|EET22121.1| zinc-binding domain-containing protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|125619738|gb|EAZ48265.1| zinc-binding domain protein [Vibrio cholerae MO10] [NCBI NR]
    • Organism: Vibrio cholerae MO10
    Length: 193 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAISARITV FKNPWSVILS ASLFSAQDEQ FMRRAIVLAA QAEAQGEVPV GAVLVRDGEI  60
   61 IAEGWNGSIT NHDATAHAEI EVIRKAGKAL SNYRLLDTTL YVTLEPCPMC AGALLHSRVK 120
  121 RIVYGAPDLK AGAAGTVMDL FSSQAAYHYA TVEKGLLEEE CRAQLQAFFQ RRRKEIKAKR 180
  181 DAERKNAERK NER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 48.69897 Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.07800438828306 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.73753215913649 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.66914541186463 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.516651342237498 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.385948807040181 bayes_pls_golite062009
  • hydrolase activity
    		•  0.34203636465094 bayes_pls_golite062009
  • transferase activity
    		•  0.268221683084535 bayes_pls_golite062009
  • deaminase activity
    		•  0.100786900220128 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle