YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|125619243, gi...

General Information:
Name(s) found: gi|254851255 [NCBI NR]
gi|254846960 [NCBI NR]
gi|125619243 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|254851255|ref|ZP_05240605.1| ComF family protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|254846960|gb|EET25374.1| ComF family protein [Vibrio cholerae MO10] [NCBI NR]
  • gi|125619243|gb|EAZ47773.1| ComF family protein [Vibrio cholerae MO10] [NCBI NR]
    • Organism: Vibrio cholerae MO10
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQPCTNTRS CPCPLTCQYN AMVTVSPSIS IFIHSANWQD EAHYPDSWLA MLTHWLRKTT  60
   61 APLLTPECHL CRLALDTNSP FGVCSACQAW LEHGYRCARC GLPTLTPVDQ CGQCLGQPPP 120
  121 WRKLMCVGDY RFPLSDAVHQ LKYQRQFWQA PRLAKLLATQ INEPAPLLCS VPLHWRRRWQ 180
  181 RGFNQSDLLA RELANMLNVE YDHQLFARRR ATPHQQGLSK AQRIHNLRDA FVLNHPPNQP 240
  241 HVAIVDDVVT TGSTIRHLCD LLLDVGVQSI DIYCICRTPE PKDSHG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 37.522879 Phosphoribosylpyrophosphate synthetase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.13215401486422 bayes_pls_golite062009
  • transferase activity
    		•  2.01480567121657 bayes_pls_golite062009
  • diphosphotransferase activity
    		•  1.2980439591794 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  0.899227917236164 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.782718700399924 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle