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Protein Overview: gi|125558874

General Information:
Name(s) found: gi|125558874 [NCBI NR]
Description(s) found:
  • gi|125558874|gb|EAZ04410.1| hypothetical protein OsI_26554 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLKRELEK KRKAATADFG GKSFVRRSEL EQKQLQKRRH EEHRQLLSKA PPATSSASAA  60
   61 GSDPSNPNAD PAQSSAANPN PNSSSSAAAA SVPPGLAGKK TAQDEALLSE ERRIDELDLP 120
  121 RHEVVRRLRI LREPVTLFGE DDADRLARLK FVLKSGVIDD IDDLDMTEGQ TNDFLRDMVE 180
  181 LRKRQRAGRD TYVKGKGKRA GGGDGGEGGA GGDNADDGDG DGRRSGDDAD ADKDSKRMKT 240
  241 KFEELCDEDK ILVFFKKLLI EWNQELDEMP ELEKRTAKGK SMVATFKQCA RYLSPLFEFC 300
  301 RKQVLPDDIR QALLVIVECC MKRDYLAAMD QYIKLAIGNA PWPIGVTMVG IHERSAREKI 360
  361 YTNSVAHIMN DETTRKYLQS IKRLMTLCQR RYPALPSKSV EFNSLANGSD LQALLSEEKD 420
  421 PGNPPSEDRL RLMPASKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 7.154902 Heavy meromyosin subfragment
    2 View Details [305..438] PSI-BLAST 18.39794 Functional domain of the splicing factor Prp18


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle