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Protein Overview: gi|125549990

General Information:
Name(s) found: gi|125549990 [NCBI NR]
Description(s) found:
  • gi|125549990|gb|EAY95812.1| hypothetical protein OsI_17683 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 667 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGQKNSVEQ LADVFGFDHA SSSGNPVMDQ QGYWNNILGS VESHNLQGYQ VNRSDGTIPY  60
   61 GNGVHQNGTF LGFWESGEAS ASGSSLHFGG SNEIKAEQRN IGGGLRIGER RLVAERNLSL 120
  121 DNVDIGLNIN GNDLSGENSN VNGASQGSEL HGGCSHTGSN GQASELRLHP YRTFILGADQ 180
  181 PEPFNSLNGS ENPLGDFSLM PEGIDQRPGS SLDGRRLACK RKNIEGVNGQ CSAGASTSFS 240
  241 HRNDSIFHNI ASSSHNPSPS TNLPSPNCLL VPSTLDEQLP RYGATTAGLS SSSYDPSGGN 300
  301 NNSGGSQRSF RPRTSLAQHI GPYGVWPSSS TIRHSNSWNH QPPPFQSSFD EPPEVIPVVS 360
  361 SLNFQYQHPM NVVPGIPQMS HRFTGPGASS SRTGNLENRI IGSEEFSARN VVATSFPDAV 420
  421 PPAALDMRHL IPEPSSWNVD GRATTIPGNV PSSSRANTNS MVNPPAGSPF IAHQNLHRRN 480
  481 PRNLSEEISR LSGALRGHQH PRLRSGFLLE RQGDGVWGVP LSTRSREGRR LIEIRNALEM 540
  541 IHRGENVRFE SIFYGGVDIH DRHRDMRLDI DNMSYEELLA LEERIGNVST GLSEEEVTKL 600
  601 LKQRKFSSWR LEASVEEEPC CICQEEYVDG DDLGTLDCGH DFHVGCVRQW LVVKNTCPIC 660
  661 KNTALKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] deduced N/A No confident structure predictions are available.
    2 View Details [83..218] MSA 2.224993 View MSA. No confident structure predictions are available.
    3 View Details [219..356] MSA 3.236991 View MSA. No confident structure predictions are available.
    4 View Details [357..516] MSA 4.23399 View MSA. No confident structure predictions are available.
    5 View Details [517..605] deduced N/A No confident structure predictions are available.
    6 View Details [606..667] PSI-BLAST 10.39794 Solution structure of RING finger in RING finger protein 38


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle