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Protein Overview: gi|114558427, gi...

General Information:
Name(s) found: gi|114558427 [NCBI NR]
gi|114558425 [NCBI NR]
Description(s) found:
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  • gi|114558427|ref|XP_513732.2| PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 6 [Pan troglodytes] [NCBI NR]
  • gi|114558425|ref|XP_001161607.1| PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 5 [Pan troglodytes] [NCBI NR]
  • [chimp_Ens_120109_contam.fas]
  • PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 5 [Pan troglodytes] [nr-271106-contam.fasta]
  • PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 6 [Pan troglodytes] [nr-271106-contam.fasta]
    • Organism: Pan troglodytes
    Length: 534 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQAEIKLCS LLLQEHFGEI VEKIGVHLIR TGSQPLRVIA HDTGTSLDQV KKALCVLVQH  60
   61 NLVSYQVHKR GVVEYEAQCS RVLRMLRYPR YIYTTKTLYS DTGELIVEEL LLNGKLTMSA 120
  121 VVKKVADRLT ETMEDGKTMD YAEVSNTFVR LADTHFVQRC PSVPTTENSD PGPPPPAPTL 180
  181 VINEKDMYLV PKLSLIGKGK RRRSSDEDAA GEPKAKRPKY TTDNKEPIPD DGIYWQANLD 240
  241 RFHQHFRDQA IVSAVANRMD QTSSEIVRTM LRMSEITTSS SAPFTQPLSS NEIFRSLPVG 300
  301 YNISKQVLDQ YLTLLADDPL EFVGKSGDSG GGMYVINLHK ALASLATATL ESVVQERFGS 360
  361 RCARIFRLVL QKKHIEQKQV EDFAMIPAKE AKDMLYKMLS ENFMSLQEIP KTPDHAPSRT 420
  421 FYLYTVNILS AARMLLHRCY KSIANLIERR QFETKENKRL LEKSQRVEAI IASMQATGAE 480
  481 EAQLQEIEEM ITAPERQQLE TLKRNVNKLD ASEIQVDETI FLLESYIECT MKRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] Pfam 29.251812 No description for PF08221.2 was found. No confident structure predictions are available.
    2 View Details [135..330] Pfam 41.045757 No description for PF05645.4 was found. No confident structure predictions are available.
    3 View Details [331..534] FFAS03 2.53 An extended winged helix domain in general transcription factor E/IIE alpha


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle